RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SATB2Q9UPW6 733 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 HBS1LQ9Y450 684 aaKnown RBP4.98□□□□□ -1.61
ATXN3-239ENST00000556315 CFAP46Q8IYW2 2715 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 MYO16Q9Y6X6 1858 aa4.98□□□□□ -1.61
ATXN3-239ENST00000556315 TSC2P49815 1807 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 DENND4CQ5VZ89 1909 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ZNF638Q14966 1978 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 EDDM13A0A1B0GTR0 161 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ENO4A6NNW6 628 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SCDO00767 359 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SCAMP1O15126 338 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CLIC2O15247 247 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 EIF3DO15371 548 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 FFAR2O15552 330 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SLC7A4O43246 635 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 TNFSF15O95150 251 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 KIF20AO95235 890 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SRPRAP08240 638 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 THEGLP0DJG4 465 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 GIMD1P0DJR0 217 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 FAHP16930 419 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CD70P32970 193 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CYP2J2P51589 502 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ADPRHP54922 357 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 YWHAGP61981 247 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 TLE1Q04724 770 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SEPT7Q16181 437 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SETMARQ53H47 684 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 C3orf38Q5JPI3 329 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 PM20D1Q6GTS8 502 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SCARA5Q6ZMJ2 495 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CLEC14AQ86T13 490 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CCDC117Q8IWD4 279 aaPredicted RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 AADATQ8N5Z0 425 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 WDR36Q8NI36 951 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 FIBINQ8TAL6 211 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 EXTL1Q92935 676 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 USP7Q93009 1102 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 AZIN2Q96A70 460 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ATXN7L3BQ96GX2 97 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SCYL1Q96KG9 808 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 LMLNQ96KR4 655 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 PANK2Q9BZ23 570 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 BRINP2Q9C0B6 783 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CYP3A43Q9HB55 503 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 OLA1Q9NTK5 396 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 UCKL1Q9NWZ5 548 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 NLGN3Q9NZ94 848 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 NCKIPSDQ9NZQ3 722 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CGNQ9P2M7 1197 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 CYTH4Q9UIA0 394 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ERVW-1Q9UQF0 538 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ENTPD2Q9Y5L3 495 aa4.97□□□□□ -1.61
ATXN3-239ENST00000556315 SRPRBQ9Y5M8 271 aaKnown RBP4.97□□□□□ -1.61
ATXN3-239ENST00000556315 ANAPC1Q9H1A4 1944 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 COL5A1P20908 1838 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 A0A1W2PNU3 283 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CPED1A4D0V7 1026 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CLEC18AA5D8T8 446 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 TTC34A8MYJ7 566 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 IRAK2O43187 625 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PLRG1O43660 514 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 EXOC3O60645 756 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 TBL1XO60907 577 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PPFIA2O75334 1257 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 TCEA3O75764 348 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PIAS2O75928 621 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 MOCS3O95396 460 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 VNN1O95497 513 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 ZBED1O96006 694 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 ASS1P00966 412 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 IL1BP01584 269 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 LTFP02788 710 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 ITGA2BP08514 1039 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 TGM2P21980 687 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 MAT2AP31153 395 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 NNMTP40261 264 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CSKP41240 450 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 STAT6P42226 847 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PSMD8P48556 350 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 SLC11A2P49281 568 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CASP4P49662 377 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 SLC8A3P57103 927 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 IL2P60568 153 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PPP2CBP62714 309 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PPP2CAP67775 309 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 ECT2LQ008S8 904 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 AMPD3Q01432 767 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 INCA1Q0VD86 236 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 ELAVL3Q14576 367 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 RAB41Q5JT25 222 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 FAM46CQ5VWP2 391 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 RNF219Q5W0B1 726 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 NEK5Q6P3R8 708 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 CLEC18BQ6UXF7 455 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 RBM44Q6ZP01 1051 aaKnown RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 EPM2AIP1Q7L775 607 aaPredicted RBP4.96□□□□□ -1.62
ATXN3-239ENST00000556315 C14orf80Q86SX3 495 aa4.96□□□□□ -1.62
ATXN3-239ENST00000556315 PIGZQ86VD9 579 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms