RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLC35F5Q8WV83 523 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CENPTQ96BT3 561 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PPP1R16AQ96I34 528 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 KIRREL1Q96J84 757 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 SLC45A3Q96JT2 553 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 BTN2A3PQ96KV6 586 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 CCDC114Q96M63 670 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 TAAR9Q96RI9 348 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 KCTD10Q9H3F6 313 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PRDM8Q9NQV8 689 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 AKAP7Q9P0M2 348 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-236ENST00000556220 GPR34Q9UPC5 381 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 HS3ST2Q9Y278 367 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 PCDHGA3Q9Y5H0 932 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 ST14Q9Y5Y6 855 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 RNF215Q9Y6U7 377 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 SDK2Q58EX2 2172 aa6.95□□□□□ -1.3
ATXN3-236ENST00000556220 OTOGQ6ZRI0 2925 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 PVALEFA0A1B0GWK0 134 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TCAF2A6NFQ2 919 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 K7ERQ8 282 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 O00370 1275 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 PDXKO00764 312 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TOR1BO14657 336 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 MAPK13O15264 365 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TSPAN6O43657 245 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 DUX1O43812 170 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 FBXO21O94952 628 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 CLDN1O95832 211 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 APOEP02649 317 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TRIM49P0CI25 452 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TRIM49CP0CI26 452 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 VDRP11473 427 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 SRCP12931 536 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 ADRB3P13945 408 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 GNA15P30679 374 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 EIF4A3P38919 411 aaKnown RBP6.94□□□□□ -1.3
ATXN3-236ENST00000556220 RGS7P49802 495 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 THOP1P52888 689 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 YPEL5P62699 121 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 CEBPZQ03701 1054 aaKnown RBP6.94□□□□□ -1.3
ATXN3-236ENST00000556220 ENPEPQ07075 957 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 SEPT6Q14141 434 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 C16orf72Q14CZ0 275 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 SLC39A14Q15043 492 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 DEFB109BQ30KR1 87 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 KRTAP21-3Q3LHN1 58 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 RABGAP1LQ5R372 815 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 PHF19Q5T6S3 580 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 C1QL3Q5VWW1 255 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 KRT39Q6A163 491 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TCTN3Q6NUS6 607 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 FBXL22Q6P050 247 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 LCLAT1Q6UWP7 414 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 DPY19L3Q6ZPD9 716 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TAC4Q86UU9 113 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 GKN2Q86XP6 184 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 FAM114A1Q8IWE2 563 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 CACNA2D3Q8IZS8 1091 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 ATP6V0D2Q8N8Y2 350 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 IQUBQ8NA54 791 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 ATP11CQ8NB49 1132 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 GPR156Q8NFN8 814 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 OR52K2Q8NGK3 314 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 CLEC4CQ8WTT0 213 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 SEMA4DQ92854 862 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 DHX58Q96C10 678 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 HSFY1Q96LI6 401 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 PRMT1Q99873 361 aaKnown RBP6.94□□□□□ -1.3
ATXN3-236ENST00000556220 EDEM3Q9BZQ6 932 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 BLZF1Q9H2G9 400 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TMEM8AQ9HCN3 771 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 IL36AQ9UHA7 158 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 SLC12A6Q9UHW9 1150 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 VPS28Q9UK41 221 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 KIAA1257Q9ULG3 409 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 SMC3Q9UQE7 1217 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 TP53TG5Q9Y2B4 290 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 DAAM1Q9Y4D1 1078 aa6.94□□□□□ -1.3
ATXN3-236ENST00000556220 PRRC2CQ9Y520 2896 aaKnown RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 WIPF3A6NGB9 483 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 EFCAB7A8K855 629 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 KCNU1A8MYU2 1149 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 H3BS24 57 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 K7EM74 188 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 HGSO14964 777 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 SMAD6O43541 496 aaKnown RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 SNAP91O60641 907 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 PRKAR1AP10644 381 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 FGF3P11487 239 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CTSEP14091 401 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CD19P15391 556 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 NR1D1P20393 614 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 RRM1P23921 792 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 CASP1P29466 404 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 L1CAMP32004 1257 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 GTF2H1P32780 548 aa6.93□□□□□ -1.3
ATXN3-236ENST00000556220 KIR3DL1P43629 444 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms