RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 BCCIPQ9P287 314 aaKnown RBP eCLIP11.05□□□□□ -0.64
TMEM260-208ENST00000555905 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 RIMKLBQ9ULI2 386 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 NCKAP1Q9Y2A7 1128 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 FAM169AQ9Y6X4 670 aa11.05□□□□□ -0.64
TMEM260-208ENST00000555905 A0A1W2PP55 124 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 PLK4O00444 970 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 AURKAO14965 403 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 CLDN7O95471 211 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 NDUFV2P19404 249 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 HMGCLP35914 325 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 MMP12P39900 470 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 HADHAP40939 763 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 MAGEA9P43362 315 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 ZNF140P52738 457 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 FRG1Q14331 258 aaKnown RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 SLC29A2Q14542 456 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 CASP8Q14790 479 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 UAP1Q16222 522 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 CNGA3Q16281 694 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 LONRF1Q17RB8 773 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 PIP5KL1Q5T9C9 394 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 LRRC66Q68CR7 880 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 ESRP1Q6NXG1 681 aaKnown RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 TSPAN33Q86UF1 283 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 PGBD3Q8N328 593 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 SPEM1Q8N4L4 309 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 TTC30BQ8N4P2 665 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 AADATQ8N5Z0 425 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 TSTD1Q8NFU3 115 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 GABPB2Q8TAK5 448 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 FBF1Q8TES7 1133 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 HMGB4Q8WW32 186 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 MFSD3Q96ES6 412 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 MRGPRX1Q96LB2 322 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 ZNF778Q96MU6 729 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 FCRL3Q96P31 734 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 C19orf43Q9BQ61 176 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 CCDC77Q9BR77 488 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 TRIM56Q9BRZ2 755 aaKnown RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 SLC6A17Q9H1V8 727 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 CHRDQ9H2X0 955 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 TREX1Q9NSU2 369 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 NLE1Q9NVX2 485 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 POLR3BQ9NW08 1133 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-208ENST00000555905 FBXL12Q9NXK8 326 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 KCTD3Q9Y597 815 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 TRIOO75962 3097 aa11.04□□□□□ -0.64
TMEM260-208ENST00000555905 ZCWPW2A0A1B0GU75 182 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 TCRBV9S1A1TA0A576 114 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 H0Y858 1186 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 AREL1O15033 823 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 SLC7A4O43246 635 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 TSPAN6O43657 245 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 BUD23O43709 281 aaKnown RBP11.03□□□□□ -0.64
TMEM260-208ENST00000555905 AP1G1O43747 822 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 RPP40O75818 363 aaKnown RBP11.03□□□□□ -0.64
TMEM260-208ENST00000555905 VAPBO95292 243 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 ELFN1P0C7U0 828 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 GABRG2P18507 467 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 DRD3P35462 400 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 PRAMEP78395 509 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 TMPRSS15P98073 1019 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 SEMG2Q02383 582 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 ACVR1Q04771 509 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 IFFO1Q0D2I5 559 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 GAS6Q14393 721 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 CDKN3Q16667 212 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 KLHL38Q2WGJ6 581 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 TMEM52BQ4KMG9 183 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 AGBL4Q5VU57 503 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 ZDHHC20Q5W0Z9 365 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 ALS2CLQ60I27 953 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 PDPK2PQ6A1A2 396 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 KIAA0930Q6ICG6 404 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-208ENST00000555905 ZNF449Q6P9G9 518 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 USP30Q70CQ3 517 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 CYS1Q717R9 158 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 KBTBD6Q86V97 674 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 RASSF3Q86WH2 238 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 OR4K2Q8NGD2 314 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 OR13C4Q8NGS5 318 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 OR6P1Q8NGX9 317 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 UHMK1Q8TAS1 419 aaKnown RBP11.03□□□□□ -0.64
TMEM260-208ENST00000555905 CXorf40AQ8TE69 158 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 CDKL2Q92772 493 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 HDAC10Q969S8 669 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 CERS2Q96G23 380 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 DNAJC1Q96KC8 554 aaKnown RBP11.03□□□□□ -0.64
TMEM260-208ENST00000555905 CYTH2Q99418 400 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 EPB41L4BQ9H329 900 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 BPIFA1Q9NP55 256 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 RAD18Q9NS91 495 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 C20orf96Q9NUD7 363 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-208ENST00000555905 PKD2L2Q9NZM6 624 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 IL17CQ9P0M4 197 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 SLC2A6Q9UGQ3 507 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 FZD4Q9ULV1 537 aa11.03□□□□□ -0.64
TMEM260-208ENST00000555905 PCDHGA4Q9Y5G9 962 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms