RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 LIPCP11150 499 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 ANK1P16157 1881 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 PRLRP16471 622 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 ZNF18P17022 549 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 HNRNPA2B1P22626 353 aaKnown RBP4.93□□□□□ -1.62
ATXN3-229ENST00000554672 UGT1A5P35504 534 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 CASRP41180 1078 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 PIK3CAP42336 1068 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 TBX4P57082 545 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 NUCB2P80303 420 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SPIDRQ14159 915 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 CLCA4Q14CN2 919 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SLC39A14Q15043 492 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SKIDA1Q1XH10 827 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 ZNF284Q2VY69 593 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SPATS1Q496A3 300 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 ACCSLQ4AC99 568 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 DCAF6Q58WW2 860 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 MS4A13Q5J8X5 152 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 NADSYN1Q6IA69 706 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 MSANTD2Q6P1R3 559 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 GUSBP11Q6P575 273 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 MMS22LQ6ZRQ5 1243 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 UNC13DQ70J99 1090 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 RAB11FIP2Q7L804 512 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 BHLHA9Q7RTU4 235 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 PTRH1Q86Y79 214 aaKnown RBP4.93□□□□□ -1.62
ATXN3-229ENST00000554672 TRIM59Q8IWR1 403 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 APCDD1Q8J025 514 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SIX6OS1Q8N1H7 587 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 CFAP52Q8N1V2 620 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SCML4Q8N228 414 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 PDILTQ8N807 584 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 IQUBQ8NA54 791 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 CPLX3Q8WVH0 158 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 BTN2A2Q8WVV5 523 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 KCTD13Q8WZ19 329 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 ZBTB8AQ96BR9 441 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 MRRFQ96E11 262 aaKnown RBP4.93□□□□□ -1.62
ATXN3-229ENST00000554672 BMFQ96LC9 184 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 RBM15Q96T37 977 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATXN3-229ENST00000554672 C7orf25Q9BPX7 421 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 STRADBQ9C0K7 418 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 EPN3Q9H201 632 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 CNGB3Q9NQW8 809 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 ANAPC2Q9UJX6 822 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SARDHQ9UL12 918 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 SMC3Q9UQE7 1217 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 MORC2Q9Y6X9 1032 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-229ENST00000554672 AHCTF1Q8WYP5 2266 aa4.93□□□□□ -1.62
ATXN3-229ENST00000554672 USP9XQ93008 2570 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 SPTY2D1-AS1A0A0U1RR47 76 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 PVALEFA0A1B0GWK0 134 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 TULP2O00295 520 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 NTN3O00634 580 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 MUSKO15146 869 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 MAPK13O15264 365 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 TBX1O43435 398 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 PCDH8O95206 1070 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 JMJD7P0C870 316 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 CD82P27701 267 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 RABIFP47224 123 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 GCLMP48507 274 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 STK19P49842 368 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 VAMP7P51809 220 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 PDX1P52945 283 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 PLK1P53350 603 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 METAP1P53582 386 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 RAD23BP54727 409 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 CLDN2P57739 230 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 TAS2R38P59533 333 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 CEBPZQ03701 1054 aaKnown RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 ADIGQ0VDE8 80 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 SRSF6Q13247 344 aaKnown RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 KCNAB2Q13303 367 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 FZD2Q14332 565 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 NUMA1Q14980 2115 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 DLG2Q15700 870 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 DEFB133Q30KQ1 61 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 C1orf220Q5T0J3 134 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 PIP5KL1Q5T9C9 394 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 ESRP1Q6NXG1 681 aaKnown RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 BORAQ6PGQ7 559 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 CRTC1Q6UUV9 634 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 GCNT7Q6ZNI0 430 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 PARGQ86W56 976 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 CCDC103Q8IW40 242 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 SLC22A18ASQ8N1D0 253 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 SLC4A11Q8NBS3 891 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 ZNF548Q8NEK5 533 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 TMIEQ8NEW7 156 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 SPATA20Q8TB22 786 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 LMX1AQ8TE12 382 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 TAS1R2Q8TE23 839 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 IRGQQ8WZA9 623 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 KLK6Q92876 244 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 ERCC4Q92889 916 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-229ENST00000554672 TMEM159Q96B96 161 aa4.92□□□□□ -1.62
ATXN3-229ENST00000554672 ANAPC16Q96DE5 110 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms