RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 REP15Q6BDI9 236 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 NAPEPLDQ6IQ20 393 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SEZ6L2Q6UXD5 910 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GSTA5Q7RTV2 222 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ZBTB33Q86T24 672 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TAC4Q86UU9 113 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RETREG3Q86VR2 466 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ANKMY2Q8IV38 441 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CPXM2Q8N436 756 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KIF2BQ8N4N8 673 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 FIBCD1Q8N539 461 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 C12orf29Q8N999 325 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 L3MBTL4Q8NA19 623 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RDH13Q8NBN7 331 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PIK3C3Q8NEB9 887 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GDAP1Q8TB36 358 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CHPT1Q8WUD6 406 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 OPTNQ96CV9 577 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ZIC5Q96T25 663 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MAGEB5Q9BZ81 275 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TSPYL2Q9H2G4 693 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MRPL46Q9H2W6 279 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PRDM12Q9H4Q4 367 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TUT1Q9H6E5 874 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SP110Q9HB58 689 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PARVBQ9HBI1 364 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RAB6BQ9NRW1 208 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TMLHEQ9NVH6 421 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 FAIMQ9NVQ4 179 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MRPS18AQ9NVS2 196 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PNPOQ9NVS9 261 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MARCH5Q9NX47 278 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ETAA1Q9NY74 926 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 FBXO10Q9UK96 956 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PCTPQ9UKL6 214 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 VANGL2Q9ULK5 521 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HS3ST4Q9Y661 456 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TLL2Q9Y6L7 1015 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 LRRIQ4A6NIV6 560 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 DDX39AO00148 427 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 RSL1D1O76021 490 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ANXA9O76027 345 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 JUNP05412 331 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HLA-DQB2P05538 268 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SPATA31D3P0C874 917 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ZCCHC18P0CG32 403 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 ODC1P11926 461 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TFEBP19484 476 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CFPP27918 469 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 NMBRP28336 390 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TEAD1P28347 426 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TTKP33981 857 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PGM1P36871 562 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 GRIK1P39086 918 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLC1A2P43004 574 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PPP3CCP48454 512 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HLCSP50747 726 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 NRLP54845 237 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 AQP4P55087 323 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 EN1Q05925 392 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PEX6Q13608 980 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PDE7AQ13946 482 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KEAP1Q14145 624 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 UBAP2LQ14157 1087 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SEMA3AQ14563 771 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PDCD2Q16342 344 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MYLK3Q32MK0 819 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SEZ6Q53EL9 994 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MPP7Q5T2T1 576 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HHATQ5VTY9 493 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLC8B1Q6J4K2 584 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 MACC1Q6ZN28 852 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SPATA31D4Q6ZUB0 917 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KCNMB4Q86W47 210 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 FBXO16Q8IX29 292 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PYROXD2Q8N2H3 581 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 FSTL5Q8N475 847 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 OR4C15Q8NGM1 316 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 REXO5Q96IC2 774 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 APBA2Q99767 749 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 EPS8L2Q9H6S3 715 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 LHX3Q9UBR4 397 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TRPS1Q9UHF7 1281 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLCO3A1Q9UIG8 710 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PCDHGB4Q9UN71 923 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 SLC8A2Q9UPR5 921 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 DNAJC16Q9Y2G8 782 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PCDHGB5Q9Y5G0 923 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KLK4Q9Y5K2 254 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 YJEFN3A6XGL0 299 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CAPN9O14815 690 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 HNRNPRO43390 633 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TULP3O75386 442 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CNTN5O94779 1100 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 IPO13O94829 963 aaKnown RBP3.45□□□□□ -1.86
SEC23A-207ENST00000554615 TNFAIP8O95379 198 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 CBSLP0DN79 551 aa3.45□□□□□ -1.86
SEC23A-207ENST00000554615 KITP10721 976 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms