RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MRGPRX4Q96LA9 322 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 SYT15Q9BQS2 421 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 LDAHQ9H6V9 325 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 MANSC1Q9H8J5 431 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 CD93Q9NPY3 652 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 DNAJC17Q9NVM6 304 aaKnown RBP5.09□□□□□ -1.59
ATXN3-228ENST00000554592 CHORDC1Q9UHD1 332 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-228ENST00000554592 EIF2B4Q9UI10 523 aaKnown RBP5.09□□□□□ -1.59
ATXN3-228ENST00000554592 ITGA11Q9UKX5 1188 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 STON1Q9Y6Q2 735 aa5.09□□□□□ -1.59
ATXN3-228ENST00000554592 LOC400499M0QZD8 3231 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 LAMA1P25391 3075 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 THADAQ6YHU6 1953 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 KCNJ18B7U540 433 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 F8VP50 259 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 TPP1O14773 563 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 PAPSS1O43252 624 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 COCHO43405 550 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 HCRTO43612 131 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 CACNG3O60359 315 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 SYNCRIPO60506 623 aaKnown RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 LDHAP00338 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 GASTP01350 101 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 IGLV3-19P01714 112 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 FTLP02792 175 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 JUNP05412 331 aaKnown RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 KRT19P08727 400 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 CISD3P0C7P0 127 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 ACADMP11310 421 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 C6P13671 934 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 TYRP14679 529 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 RHCEP18577 417 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 WARSP23381 471 aaKnown RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 ADSSP30520 456 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 CRHR1P34998 444 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 MSX2P35548 267 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 GNL1P36915 607 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 CASRP41180 1078 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 IL12RB1P42701 662 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 TUBP50607 506 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 TOB1P50616 345 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 CCT8P50990 548 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 UCNP55089 124 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 PER3P56645 1201 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 PSMC1P62191 440 aaKnown RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 TLE3Q04726 772 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 DUSP2Q05923 314 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 SRSF1Q07955 248 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 GRM7Q14831 915 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 CCDC142Q17RM4 750 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 FUT11Q495W5 492 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 COBLL1Q53SF7 1204 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 NPNTQ6UXI9 565 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 FAM156AQ8NDB6 213 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 UCMAQ8WVF2 138 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 STON2Q8WXE9 905 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 POMGNT1Q8WZA1 660 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 RGMAQ96B86 450 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 SLC39A13Q96H72 371 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 PCED1BQ96HM7 432 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 HPDLQ96IR7 371 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 PLIN2Q99541 437 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 HNRNPABQ99729 332 aaKnown RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 REEP2Q9BRK0 252 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 BBS2Q9BXC9 721 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 B3GNT5Q9BYG0 378 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 NACA2Q9H009 215 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 ST6GALNAC4Q9H4F1 302 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 ZHX3Q9H4I2 956 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 FAM204AQ9H8W3 233 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 COMMD8Q9NX08 183 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 THAP10Q9P2Z0 257 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-228ENST00000554592 NBEAQ8NFP9 2946 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 ATG2BQ96BY7 2078 aa5.08□□□□□ -1.6
ATXN3-228ENST00000554592 PDCD11Q14690 1871 aaKnown RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 A0A1B0GTQ1 180 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TISP43B9A030 160 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 NEDD8-MDP1E9PL57 170 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 FAM227AF5H4B4 570 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 SLC16A6O15403 523 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TIMM44O43615 452 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 SLC28A2O43868 658 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TSPAN3O60637 253 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 PEX14O75381 377 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ZBED1O96006 694 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 HRGP04196 525 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ZDHHC11BP0C7U3 371 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 GYPEP15421 78 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 CD27P26842 260 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 CSRP3P50461 194 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 AGFG1P52594 562 aaKnown RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 HK3P52790 923 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 GOLGA8FQ08AF8 430 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 GOLGA8DPQ0D2H9 430 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 CCDC173Q0VFZ6 552 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ILKQ13418 452 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ENPP2Q13822 863 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TBC1D25Q3MII6 688 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms