RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 PALB2Q86YC2 1186 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 CCDC89Q8N998 374 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 NEXN-AS1Q8NBZ9 246 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 BICD2Q8TD16 824 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 ASB5Q8WWX0 329 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 NSUN4Q96CB9 384 aaKnown RBP5.27□□□□□ -1.57
CHD8-207ENST00000554384 ESRP2Q9H6T0 727 aaKnown RBP5.27□□□□□ -1.57
CHD8-207ENST00000554384 GPR108Q9NPR9 543 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 PBRM1Q86U86 1689 aa5.27□□□□□ -1.57
CHD8-207ENST00000554384 PLB1Q6P1J6 1458 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 A0A1W2PQ09 198 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 TNFRSF13BO14836 293 aaPredicted RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 TIMM23O14925 209 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 ITM2AO43736 263 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 SYF2O95926 243 aaKnown RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 MMP2P08253 660 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 GNLYP22749 145 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 GCH1P30793 250 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 RASSF2P50749 326 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 GALCP54803 685 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 KCTD2Q14681 263 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 WTAPQ15007 396 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 CCDC142Q17RM4 750 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 CRELD2Q6UXH1 353 aaPredicted RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 B3GNT6Q6ZMB0 384 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 MTSS1LQ765P7 747 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 SFTPA2Q8IWL1 248 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 CCDC105Q8IYK2 499 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 HJURPQ8NCD3 748 aaPredicted RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 NEK9Q8TD19 979 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 IGSF8Q969P0 613 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 ELMOD3Q96FG2 381 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 SLC41A2Q96JW4 573 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 SMARCAD1Q9H4L7 1026 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 PDZD7Q9H5P4 517 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 SH2D4AQ9H788 454 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 KRCC1Q9NPI7 259 aaPredicted RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 MKKSQ9NPJ1 570 aaPredicted RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 SETD4Q9NVD3 440 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 OR6C3Q9NZP0 311 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 NRBP1Q9UHY1 535 aa5.26□□□□□ -1.57
CHD8-207ENST00000554384 R3HDM2Q9Y2K5 976 aaKnown RBP5.26□□□□□ -1.57
CHD8-207ENST00000554384 GLI2P10070 1586 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 CUX1P39880 1505 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 RPS10-NUDT3A0A1W2PQS6 291 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 TMEM202A6NGA9 273 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 INAFM1C9JVW0 142 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 MS4A18H0YCH9 400 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 H3BQ06 376 aaPredicted RBP5.25□□□□□ -1.57
CHD8-207ENST00000554384 FTCDO95954 541 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 TUBBP07437 444 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 CSH1P0DML2 217 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 CSH2P0DML3 217 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ZNF182P17025 639 aaPredicted RBP5.25□□□□□ -1.57
CHD8-207ENST00000554384 GABRB1P18505 474 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 FBLP22087 321 aaKnown RBP5.25□□□□□ -1.57
CHD8-207ENST00000554384 SNX16P57768 344 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ZP1P60852 638 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ACVR2BQ13705 512 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ASTE1Q2TB18 679 aaPredicted RBP5.25□□□□□ -1.57
CHD8-207ENST00000554384 FNBP1LQ5T0N5 605 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 LRIF1Q5T3J3 769 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 MRPL10Q7Z7H8 261 aaKnown RBP5.25□□□□□ -1.57
CHD8-207ENST00000554384 WDR63Q8IWG1 891 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 BEST2Q8NFU1 509 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 RND1Q92730 232 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ARHGEF26Q96DR7 871 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 CALML4Q96GE6 196 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 SLITRK1Q96PX8 696 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 FAM110AQ9BQ89 295 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 NUDT16L1Q9BRJ7 211 aaKnown RBP5.25□□□□□ -1.57
CHD8-207ENST00000554384 CCDC68Q9H2F9 335 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 NDST4Q9H3R1 872 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 PLAC1Q9HBJ0 212 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ANKEF1Q9NU02 776 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 POT1Q9NUX5 634 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 CLIC5Q9NZA1 410 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 FBXL17Q9UF56 701 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 NENFQ9UMX5 172 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 RABGAP1Q9Y3P9 1069 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 PTGDR2Q9Y5Y4 395 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ADAMTS12P58397 1594 aa5.25□□□□□ -1.57
CHD8-207ENST00000554384 ADAMTSL3P82987 1691 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 ZNF521Q96K83 1311 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 FHAD1B1AJZ9 1412 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 PTPRGP23470 1445 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 EPRSP07814 1512 aaKnown RBP5.24□□□□□ -1.57
CHD8-207ENST00000554384 MADDQ8WXG6 1647 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 A8MZ25 164 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 SOCS2O14508 198 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 VCYO14598 125 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 FIBPO43427 364 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 RGS14O43566 566 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 MOSPD3O75425 235 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 SLC25A12O75746 678 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 MTA2O94776 668 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 HOXB5P09067 269 aa5.24□□□□□ -1.57
CHD8-207ENST00000554384 AKR1B1P15121 316 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms