RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CNGA3Q16281 694 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CLPPQ16740 277 aaPredicted RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 SMTNL2Q2TAL5 461 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TDRD12Q587J7 1177 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CERCAMQ5T4B2 595 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 MARC1Q5VT66 337 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 RD3Q7Z3Z2 195 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 NLRP8Q86W28 1048 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PGBD5Q8N414 524 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 ATPAF2Q8N5M1 289 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TEX26Q8N6G2 289 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PAF1Q8N7H5 531 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 KYQ8NBH2 561 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PLA2G15Q8NCC3 412 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 NSMCE1Q8WV22 266 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 OR1E3Q8WZA6 343 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 SLC39A7Q92504 469 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CCDC74AQ96AQ1 378 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TMEM159Q96B96 161 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 NUS1Q96E22 293 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 DTD2Q96FN9 168 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 SCRN2Q96FV2 425 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PDXPQ96GD0 296 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 NSMCE3Q96MG7 304 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TMEM74Q96NL1 305 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 GFM1Q96RP9 751 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 MCCC1Q96RQ3 725 aaPredicted RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 NUP85Q9BW27 656 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TEX101Q9BY14 249 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 STRADBQ9C0K7 418 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 LRRN3Q9H3W5 708 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 WDR26Q9H7D7 661 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PCDH18Q9HCL0 1135 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 FGF22Q9HCT0 170 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 TRNAU1APQ9NX07 287 aaKnown RBP6.62□□□□□ -1.35
SLIRP-203ENST00000554074 GULP1Q9UBP9 304 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 B4GALT6Q9UBX8 382 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 AMACRQ9UHK6 382 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 LCMT1Q9UIC8 334 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 ANAPC7Q9UJX3 599 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 CAPN11Q9UMQ6 739 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 PCDHGA7Q9Y5G6 932 aa6.62□□□□□ -1.35
SLIRP-203ENST00000554074 A0A087X0T9 212 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 A0A1W2PQM1 296 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PRSS38A1L453 326 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CAPN8A6NHC0 703 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 MYO1FO00160 1098 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PLD2O14939 933 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 KLK10O43240 276 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 FZD6O60353 706 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 NOBOXO60393 691 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TNFSF15O95150 251 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PGLSO95336 258 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CPP00450 1065 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PYGLP06737 847 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TPM1P09493 284 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 FAM228BP0C875 321 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TCF4P15884 667 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF30P17039 623 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 IL4RP24394 825 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 HNRNPH3P31942 346 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ARSEP51690 589 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 INHBCP55103 352 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CXADRP78310 365 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CCL7P80098 99 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CDK3Q00526 305 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ZFP36L1Q07352 338 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 VAC14Q08AM6 782 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 C19orf57Q0VDD7 668 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 GALNT2Q10471 571 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TRAF2Q12933 501 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 HLTFQ14527 1009 aaKnown RBP eCLIP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 NR1D2Q14995 579 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ACOX1Q15067 660 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PAFAH1B3Q15102 231 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PDK2Q15119 407 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 HADHQ16836 314 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 C14orf28Q4W4Y0 310 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ARMC12Q5T9G4 340 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 KCTD16Q68DU8 428 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TXNRD3NBQ6F5E7 133 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TIGD7Q6NT04 549 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ALKBH5Q6P6C2 394 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CRTC1Q6UUV9 634 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 USP45Q70EL2 814 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 TAF8Q7Z7C8 310 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 C17orf82Q86X59 251 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 CCNJLQ8IV13 435 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 NDUFAF2Q8N183 169 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 KIAA1524Q8TCG1 905 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 GPBAR1Q8TDU6 330 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 MAML1Q92585 1016 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 HSPH1Q92598 858 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 SCARF2Q96GP6 870 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 LGR4Q9BXB1 951 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms