RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 STK10O94804 968 aaKnown RBP23.28■■□□□ 1.32
NEK9-203ENST00000553945 ETV3P41162 512 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 CDK18Q07002 472 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 MTM1Q13496 603 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 SLC14A2Q15849 920 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 PARGQ86W56 976 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 CBARPQ8N350 705 aaPredicted RBP23.28■■□□□ 1.32
NEK9-203ENST00000553945 DTD2Q96FN9 168 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 TRIB3Q96RU7 358 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 APOOQ9BUR5 198 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 CAAP1Q9H8G2 361 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 FAM153AQ9UHL3 310 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 DNPEPQ9ULA0 475 aa23.28■■□□□ 1.32
NEK9-203ENST00000553945 R3HDM2Q9Y2K5 976 aaKnown RBP23.28■■□□□ 1.32
NEK9-203ENST00000553945 ZNF30P17039 623 aa23.27■■□□□ 1.32
NEK9-203ENST00000553945 Q6ZVL8 140 aa23.27■■□□□ 1.32
NEK9-203ENST00000553945 FCRL5Q96RD9 977 aa23.27■■□□□ 1.32
NEK9-203ENST00000553945 KCTD5Q9NXV2 234 aa23.27■■□□□ 1.32
NEK9-203ENST00000553945 C1orf232A0A0U1RR37 186 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 CBFA2T3O75081 653 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 CLDN7O95471 211 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 WNT3AP56704 352 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 PTSQ03393 145 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 EIF2B5Q13144 721 aaKnown RBP23.26■■□□□ 1.31
NEK9-203ENST00000553945 GSE1Q14687 1217 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 TRIP6Q15654 476 aaKnown RBP23.26■■□□□ 1.31
NEK9-203ENST00000553945 ITPRIPL1Q6GPH6 555 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 CCDC70Q6NSX1 233 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 ESRP1Q6NXG1 681 aaKnown RBP23.26■■□□□ 1.31
NEK9-203ENST00000553945 KDELC1Q6UW63 502 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 MACC1Q6ZN28 852 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 RFLNAQ6ZTI6 216 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 SLC13A5Q86YT5 568 aaPredicted RBP23.26■■□□□ 1.31
NEK9-203ENST00000553945 EID2Q8N6I1 236 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 GBA3Q9H227 469 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 CARD9Q9H257 536 aa23.26■■□□□ 1.31
NEK9-203ENST00000553945 GOLGA6CA6NDK9 693 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 GOLGA6BA6NDN3 693 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 K7ESM1 405 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 ZSCAN12O43309 604 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 ZNF189O75820 626 aaPredicted RBP23.25■■□□□ 1.31
NEK9-203ENST00000553945 NDST3O95803 873 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 CSF2P04141 144 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 C1SP09871 688 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 GOLGA6DP0CG33 693 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 DGKAP23743 735 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 HTR1BP28222 390 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 TNNT3P45378 269 aaPredicted RBP23.25■■□□□ 1.31
NEK9-203ENST00000553945 STC1P52823 247 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 HNRNPKP61978 463 aaKnown RBP eCLIP23.25■■□□□ 1.31
NEK9-203ENST00000553945 SIM1P81133 766 aaPredicted RBP23.25■■□□□ 1.31
NEK9-203ENST00000553945 NFATC4Q14934 902 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 ANKRD20A2Q5SQ80 823 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 N4BP2L1Q5TBK1 243 aaPredicted RBP23.25■■□□□ 1.31
NEK9-203ENST00000553945 ANKRD20A1Q5TYW2 823 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 ANKRD20A3Q5VUR7 823 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 PNCKQ6P2M8 343 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 KANSL1Q7Z3B3 1105 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 TECPR1Q7Z6L1 1165 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 PELI3Q8N2H9 469 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 OXNAD1Q96HP4 312 aaPredicted RBP23.25■■□□□ 1.31
NEK9-203ENST00000553945 LYSMD1Q96S90 227 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 CDC6Q99741 560 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 TLR10Q9BXR5 811 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 USP29Q9HBJ7 922 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 UCKL1Q9NWZ5 548 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 GOLGA6AQ9NYA3 693 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 CD84Q9UIB8 345 aa23.25■■□□□ 1.31
NEK9-203ENST00000553945 MED19A0JLT2 244 aaPredicted RBP23.24■■□□□ 1.31
NEK9-203ENST00000553945 H3BM21 787 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 PIAS2O75928 621 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 PIRTP0C851 137 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 NME1P15531 152 aaKnown RBP23.24■■□□□ 1.31
NEK9-203ENST00000553945 JUNDP17535 347 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 REXO1L1PQ8IX06 675 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 IPMKQ8NFU5 416 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 SLC35B2Q8TB61 432 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 BAHD1Q8TBE0 780 aaPredicted RBP23.24■■□□□ 1.31
NEK9-203ENST00000553945 CCDC110Q8TBZ0 833 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 ATG4AQ8WYN0 398 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 FUBP1Q96AE4 644 aaKnown RBP23.24■■□□□ 1.31
NEK9-203ENST00000553945 WDR26Q9H7D7 661 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 KLF15Q9UIH9 416 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 TDRD6O60522 2096 aaKnown RBP23.24■■□□□ 1.31
NEK9-203ENST00000553945 CACNA1AO00555 2505 aa23.24■■□□□ 1.31
NEK9-203ENST00000553945 CABIN1Q9Y6J0 2220 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 CACNB4O00305 520 aaPredicted RBP23.23■■□□□ 1.31
NEK9-203ENST00000553945 TSHRP16473 764 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 MPP3Q13368 585 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 CDKN3Q16667 212 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 FAXCQ5TGI0 409 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 RAET1GQ6H3X3 334 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 ENPP7Q6UWV6 458 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 LYSMD3Q7Z3D4 306 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 SLC25A45Q8N413 288 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 FAM71DQ8N9W8 422 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 ATL2Q8NHH9 583 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 CCHCR1Q8TD31 782 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 MRGPRX2Q96LB1 330 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 WDR92Q96MX6 357 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms