RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 APLFQ8IW19 511 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TEX19Q8NA77 164 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 CASKIN2Q8WXE0 1202 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 SPOCK2Q92563 424 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 KIAA1143Q96AT1 154 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 SCARF2Q96GP6 870 aaPredicted RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 CFAP57Q96MR6 1250 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 CTRCQ99895 268 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 DPYSL5Q9BPU6 564 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TEX101Q9BY14 249 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 PDFQ9HBH1 243 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 PLCB1Q9NQ66 1216 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 FBXO8Q9NRD0 319 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TRNAU1APQ9NX07 287 aaKnown RBP9.08□□□□□ -0.96
PRKCH-208ENST00000553846 DNAI1Q9UI46 699 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 TLK1Q9UKI8 766 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 VPS4AQ9UN37 437 aa9.08□□□□□ -0.96
PRKCH-208ENST00000553846 MKRN2OSH3BPM6 223 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 CACNB4O00305 520 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 RFPL1O75677 317 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 MYCLP1P12525 358 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 ZNF28P17035 718 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 KELP23276 732 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 ADRA1BP35368 520 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 CLCN1P35523 988 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 RGRP47804 291 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 GPLD1P80108 840 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 CETN1Q12798 172 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 LAMB3Q13751 1172 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 SEPT6Q14141 434 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 TSR1Q2NL82 804 aaKnown RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 PRR30Q53SZ7 412 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 DPY19L2P1Q6NXN4 242 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 PNCKQ6P2M8 343 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 BRAT1Q6PJG6 821 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 WDR74Q6RFH5 385 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 SLC47A2Q86VL8 602 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 HEATR4Q86WZ0 1026 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 FAM129CQ86XR2 697 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 FMR1NBQ8N0W7 255 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 CBARPQ8N350 705 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 Q8NA96 180 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 EXOC2Q96KP1 924 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 SPATA32Q96LK8 384 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 COQ10AQ96MF6 247 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 ZNF641Q96N77 438 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 ZPBPQ9BS86 351 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 TRIM55Q9BYV6 548 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 SUV39H2Q9H5I1 410 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 WDR26Q9H7D7 661 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 SIX2Q9NPC8 291 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 RMND1Q9NWS8 449 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 OR12D3Q9UGF7 316 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 ERRFI1Q9UJM3 462 aaPredicted RBP9.07□□□□□ -0.96
PRKCH-208ENST00000553846 SLC17A4Q9Y2C5 497 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 RPS6KL1Q9Y6S9 549 aa9.07□□□□□ -0.96
PRKCH-208ENST00000553846 GOLGA6L3A6NEY3 463 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 TCP11X1B4DZS4 312 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 TRAFD1O14545 582 aaPredicted RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 BUB1O43683 1085 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 DNAJB5O75953 348 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 EML2O95834 649 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 SOD1P00441 154 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 PNMA6AP0CW24 399 aaPredicted RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 PRF1P14222 555 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 RNASE9P60153 205 aaKnown RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 RHOAP61586 193 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 CTBSQ01459 385 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 MRPL49Q13405 166 aaKnown RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 NADK2Q4G0N4 442 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 CCDC40Q4G0X9 1142 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 FAM102AQ5T9C2 384 aaPredicted RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 C16orf46Q6P387 395 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 SLC30A9Q6PML9 568 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 CEACAM20Q6UY09 585 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 DPPA4Q7L190 304 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 CAMK1DQ8IU85 385 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 FAM114A1Q8IWE2 563 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 SFRP1Q8N474 314 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 SNX21Q969T3 373 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 DHTKD1Q96HY7 919 aaPredicted RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 GSDMCQ9BYG8 508 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 TRIT1Q9H3H1 467 aaKnown RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 CARS2Q9HA77 564 aaKnown RBP9.06□□□□□ -0.96
PRKCH-208ENST00000553846 APEX2Q9UBZ4 518 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 POLHQ9Y253 713 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 PCDHGA6Q9Y5G7 932 aa9.06□□□□□ -0.96
PRKCH-208ENST00000553846 MN1Q10571 1320 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 CROCCQ5TZA2 2017 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 PCSK5Q92824 1860 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 A6NCN8 305 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 TTLL8A6PVC2 850 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 WASH4PA8MWX3 477 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 PSMA7O14818 248 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 RECKO95980 971 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 IVLP07476 585 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms