RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 CEP41Q9BYV8 373 aa10.22□□□□□ -0.77
HNRNPC-208ENST00000553753 TCEAL2Q9H3H9 227 aaPredicted RBP10.22□□□□□ -0.77
HNRNPC-208ENST00000553753 PCDH9Q9HC56 1237 aa10.22□□□□□ -0.77
HNRNPC-208ENST00000553753 SEPT10Q9P0V9 454 aa10.22□□□□□ -0.77
HNRNPC-208ENST00000553753 SPASTQ9UBP0 616 aa10.22□□□□□ -0.77
HNRNPC-208ENST00000553753 RPL26L1Q9UNX3 145 aaKnown RBP10.22□□□□□ -0.77
HNRNPC-208ENST00000553753 CCDC66A2RUB6 948 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 ANKRD66B4E2M5 251 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 CACNB4O00305 520 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 ZZEF1O43149 2961 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 GCATO75600 419 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 RFPL3O75679 317 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 PECAM1P16284 738 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 ACP1P24666 158 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 COPS2P61201 443 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 SKOR1P84550 965 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 PTSQ03393 145 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 ILKQ13418 452 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 PRKD1Q15139 912 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 SMAD1Q15797 465 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 PPP2R5EQ16537 467 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 TEX44Q53QW1 395 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 FAM182AQ5T1J6 154 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 LRRC66Q68CR7 880 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 CRTC1Q6UUV9 634 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 Q6ZVL8 140 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 NT5DC3Q86UY8 548 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 GALNT15Q8N3T1 639 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 LRRC57Q8N9N7 239 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 FAM181AQ8N9Y4 354 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 ATL2Q8NHH9 583 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 TSACCQ96A04 125 aaPredicted RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 DTD2Q96FN9 168 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 IMP4Q96G21 291 aaKnown RBP10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 TBATAQ96M53 351 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 DESI2Q9BSY9 194 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 LRRC61Q9BV99 259 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 HEMGNQ9BXL5 484 aa10.21□□□□□ -0.77
HNRNPC-208ENST00000553753 IGF2RP11717 2491 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 A0A0U1RQS6 177 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 MACROD2A1Z1Q3 448 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 GRID2IPA4D2P6 1211 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 TMEM202A6NGA9 273 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 CAPN8A6NHC0 703 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 C1QTNF9BB2RNN3 333 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 TPP1O14773 563 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 MTSS1O43312 755 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 RASGRP1O95267 797 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 HOXC4P09017 264 aaPredicted RBP10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 C1QTNF9P0C862 333 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 CKMT1AP12532 417 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 TSHRP16473 764 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 ZNF30P17039 623 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 KELP23276 732 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 RWDD2BP57060 319 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 GSDMDP57764 484 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 SRP54P61011 504 aaKnown RBP10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 DAB2P98082 770 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 C1orf61Q13536 156 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 ALG11Q2TAA5 492 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 ZCCHC8Q6NZY4 707 aaKnown RBP10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 UNQ6494/PRO21346Q6UXR6 183 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 CCNI2Q6ZMN8 369 aaPredicted RBP10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 BBS12Q6ZW61 710 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 RD3Q7Z3Z2 195 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 TECPR1Q7Z6L1 1165 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 ZC3H18Q86VM9 953 aaKnown RBP10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 HID1Q8IV36 788 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 PELI3Q8N2H9 469 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 LPCAT1Q8NF37 534 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 OR56A4Q8NGH8 313 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 GATA6Q92908 595 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 APOLD1Q96LR9 279 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 TEKT5Q96M29 485 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 WDR92Q96MX6 357 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 SMIM14Q96QK8 99 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 LYSMD1Q96S90 227 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 RBM15Q96T37 977 aaKnown RBP eCLIP10.21□□□□□ -0.781e-17■■■■■ 43.3
HNRNPC-208ENST00000553753 LGR4Q9BXB1 951 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 ADGRE3Q9BY15 652 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 SLC25A51Q9H1U9 297 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 WDR26Q9H7D7 661 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 KLQ9UEF7 1012 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 DNPEPQ9ULA0 475 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 EFR3BQ9Y2G0 817 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 PTPRBP23467 1997 aa10.21□□□□□ -0.78
HNRNPC-208ENST00000553753 LMO7DNF2Z398 122 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 APOC4-APOC2K7ER74 178 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 PDE2AO00408 941 aaPredicted RBP10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 APOC2P02655 101 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 CTSEP14091 401 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 PTPN3P26045 913 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 CTNNA2P26232 953 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 KIAA1024LP59773 190 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 DPTQ07507 201 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 ELOCQ15369 112 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 DEFB133Q30KQ1 61 aa10.2□□□□□ -0.78
HNRNPC-208ENST00000553753 TMPRSS12Q86WS5 348 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms