RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TRIM13O60858 407 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 TBL1XO60907 577 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 SOCS5O75159 536 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 XYLBO75191 536 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ZMPSTE24O75844 475 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 UBOX5O94941 541 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 KLHL2O95198 593 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 GLP2RO95838 553 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 GSRP00390 522 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 RBP1P09455 135 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 MYL2P10916 166 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 RALBP11234 206 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ALOX15P16050 662 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 PPARGP37231 505 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 SLC1A2P43004 574 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 GRIA4P48058 902 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 MAXP61244 160 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 OLIG2Q13516 323 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 DMC1Q14565 340 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 GRM3Q14832 879 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 PCLAFQ15004 111 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ACAP2Q15057 778 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 CYTH1Q15438 398 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 TYSND1Q2T9J0 566 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 PPM1LQ5SGD2 360 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 METTL21CQ5VZV1 264 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 RNF219Q5W0B1 726 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 NCEH1Q6PIU2 408 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 AFTPHQ6ULP2 937 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ZYG11AQ6WRX3 759 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 C16orf59Q7L2K0 433 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 TBC1D1Q86TI0 1168 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 CIR1Q86X95 450 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 MICALL1Q8N3F8 863 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 SLC25A41Q8N5S1 370 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ARL14EPQ8N8R7 260 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 OR7D4Q8NG98 312 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 OR13J1Q8NGT2 312 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 FIBINQ8TAL6 211 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ISG20Q96AZ6 181 aaKnown RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 OTUB2Q96DC9 234 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 MYEOVQ96EZ4 313 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF778Q96MU6 729 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 TCF25Q9BQ70 676 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 MRPL57Q9BQC6 102 aaKnown RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 MRPL46Q9H2W6 279 aaKnown RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ATXN3LQ9H3M9 355 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 NOD2Q9HC29 1040 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF334Q9HCZ1 680 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ABCF3Q9NUQ8 709 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 NLE1Q9NVX2 485 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-221ENST00000553498 OXSMQ9NWU1 459 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ZDHHC7Q9NXF8 308 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 TMEM216Q9P0N5 145 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 TBC1D14Q9P2M4 693 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 VTI1BQ9UEU0 232 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 LNPEPQ9UIQ6 1025 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 ZFP69BQ9UJL9 534 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 VPS28Q9UK41 221 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 EMCNQ9ULC0 261 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 SLC39A10Q9ULF5 831 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 OR51B4Q9Y5P0 310 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 CAPN7Q9Y6W3 813 aa7.33□□□□□ -1.24
ATXN3-221ENST00000553498 PCNTO95613 3336 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 TTC3P53804 2025 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 A0A0G2JND7 137 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ANKRD66B4E2M5 251 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 F8W8V4 182 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF197O14709 1029 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 MUSKO15146 869 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 CD3EAPO15446 510 aaKnown RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 TMCC1O94876 653 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 PAPLNO95428 1278 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 SLC35E2BP0CK96 405 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ACRP10323 421 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ARAFP10398 606 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 IRF1P10914 325 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 FGF3P11487 239 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 HOXB4P17483 251 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 PTPN2P17706 415 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 LPOP22079 712 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 GABRB3P28472 473 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 CHRNA4P43681 627 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 SLC1A6P48664 564 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 LIG3P49916 1009 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 SCNN1BP51168 640 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 SUOXP51687 545 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 CLCN4P51793 760 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 MNAT1P51948 309 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ZNF140P52738 457 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ADARP55265 1226 aaKnown RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 DNAJB13P59910 316 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ABCE1P61221 599 aaKnown RBP7.32□□□□□ -1.24
ATXN3-221ENST00000553498 RHOAP61586 193 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ARF5P84085 180 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 ZBTB16Q05516 673 aa7.32□□□□□ -1.24
ATXN3-221ENST00000553498 SULT2A1Q06520 285 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms