RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 TRUB2O95900 331 aaKnown RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 PENKP01210 267 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 HKR1P10072 659 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 ETFAP13804 333 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 BMP7P18075 431 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 SRD5A1P18405 259 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 PRCPP42785 496 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 MRPS34P82930 218 aaKnown RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 ECT2LQ008S8 904 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 CBWD6Q4V339 395 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 NHSL2Q5HYW2 709 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 CBWD3Q5JTY5 395 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 KIAA1755Q5JYT7 1200 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 LY6G5CQ5SRR4 150 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 DHRS7BQ6IAN0 325 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 TATDN1Q6P1N9 297 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 ZNF585AQ6P3V2 769 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 AAGABQ6PD74 315 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 CNSTQ6PJW8 725 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 QSOX2Q6ZRP7 698 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 TRIM74Q86UV6 250 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 TRIM73Q86UV7 250 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 HAPLN4Q86UW8 402 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 OR8K5Q8NH50 307 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 PROKR1Q8TCW9 393 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 MR1Q95460 341 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 ARSGQ96EG1 525 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 TOX2Q96NM4 488 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 ACAT2Q9BWD1 397 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 PIH1D3Q9NQM4 214 aaKnown RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 UBA2Q9UBT2 640 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-208ENST00000553278 IL17BQ9UHF5 180 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 MOSPD1Q9UJG1 213 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 A3GALT2U3KPV4 340 aa5.88□□□□□ -1.47
SCFD1-208ENST00000553278 C17orf102A2RUQ5 167 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 OR6C76A6NM76 312 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 MAGEB17A8MXT2 336 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 PLRG1O43660 514 aaKnown RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 BCL10O95999 233 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ITGB3P05106 788 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 GJA1P17302 382 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 TFEBP19484 476 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 CASTP20810 708 aaKnown RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 AGAP20933 346 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 BMP5P22003 454 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ACADLP28330 430 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 GPR143P51810 404 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 NAE1Q13564 534 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 TUBB2AQ13885 445 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ZNF273Q14593 569 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 DLG2Q15700 870 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 TYSND1Q2T9J0 566 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 PLEKHO1Q53GL0 409 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 AWAT1Q58HT5 328 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 NCAPH2Q6IBW4 605 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 OTOAQ7RTW8 1153 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 TSPAN33Q86UF1 283 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 NOXA1Q86UR1 476 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ERC1Q8IUD2 1116 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 TUSC5Q8IXB3 177 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 POU5F2Q8N7G0 328 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 CTCFLQ8NI51 663 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 FIBINQ8TAL6 211 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 KRT35Q92764 455 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 KAT2AQ92830 837 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 OTULINQ96BN8 352 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ERO1AQ96HE7 468 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 CABS1Q96KC9 395 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 LINC00615Q96LM1 132 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ZNF830Q96NB3 372 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 NAP1L5Q96NT1 182 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 AGAP2Q99490 1192 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 EGFL8Q99944 293 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 TUBB2BQ9BVA1 445 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 GPR88Q9GZN0 384 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 OLAHQ9NV23 265 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 NDRG3Q9UGV2 375 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 FBXW11Q9UKB1 542 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 PA2G4Q9UQ80 394 aaKnown RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 ERVK-11Q9UQG0 969 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 LIPT1Q9Y234 373 aa5.87□□□□□ -1.47
SCFD1-208ENST00000553278 WBP11Q9Y2W2 641 aaKnown RBP5.87□□□□□ -1.47
SCFD1-208ENST00000553278 A0A0U1RQF3 1178 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 C1orf226A1L170 272 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 A4D1N5 150 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 DPPA5A6NC42 116 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 OTOL1A6NHN0 477 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-208ENST00000553278 POC1B-GALNT4F8VUJ3 575 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 CCDC188H7C350 402 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 DNM1LO00429 736 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 ZNF263O14978 683 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 NEURL1O76050 574 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 MMP2P08253 660 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 SNRNP70P08621 437 aaKnown RBP5.86□□□□□ -1.47
SCFD1-208ENST00000553278 SRCP12931 536 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 PMPCAQ10713 525 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 GRSF1Q12849 480 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCFD1-208ENST00000553278 ARHGEF6Q15052 776 aa5.86□□□□□ -1.47
SCFD1-208ENST00000553278 ALG10Q5BKT4 473 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms