RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 PELI3Q8N2H9 469 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 CBARPQ8N350 705 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-226ENST00000553011 PLA2G15Q8NCC3 412 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 IPMKQ8NFU5 416 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 MS4A14Q96JA4 679 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 LYSMD1Q96S90 227 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 FRMD8P1Q9BZ68 369 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-226ENST00000553011 GPR27Q9NS67 375 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 CACNA1AO00555 2505 aa14.13□□□□□ -0.15
PTCH1-226ENST00000553011 C1orf232A0A0U1RR37 186 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 PSMD11O00231 422 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 MAGEC1O60732 1142 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF189O75820 626 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-226ENST00000553011 ATXN1LP0C7T5 689 aaKnown RBP14.12□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF30P17039 623 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 CHRNA4P43681 627 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 RABIFP47224 123 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 STC1P52823 247 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 GEMP55040 296 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 GNG11P61952 73 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 MPP3Q13368 585 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 PDE1CQ14123 709 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-226ENST00000553011 INPP5AQ14642 412 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 SHBQ15464 509 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 CDKN3Q16667 212 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 ARHGEF18Q6ZSZ5 1173 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 Q6ZVL8 140 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 TAB3Q8N5C8 712 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-226ENST00000553011 SLC25A41Q8N5S1 370 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 FAM174AQ8TBP5 190 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 COG1Q8WTW3 980 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 NUS1Q96E22 293 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 DTD2Q96FN9 168 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 PBKQ96KB5 322 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 WDR24Q96S15 920 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 OSBPL9Q96SU4 736 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 ELF4Q99607 663 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-226ENST00000553011 FICDQ9BVA6 458 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 TM7SF3Q9NS93 570 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 DLL3Q9NYJ7 618 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 SMARCAL1Q9NZC9 954 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 CD84Q9UIB8 345 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF148Q9UQR1 794 aa14.12□□□□□ -0.15
PTCH1-226ENST00000553011 A0A1B0GTQ1 180 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 K7ESM1 405 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 TM4SF5O14894 197 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 GCATO75600 419 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 ANXA9O76027 345 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 METTL18O95568 372 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 AGTP01019 485 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 IFNB1P01574 187 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 EPOP01588 193 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 CD59P13987 128 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 ETS1P14921 441 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 CCT8P50990 548 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 OLIG2Q13516 323 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 FZD2Q14332 565 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 CCNG2Q16589 344 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 SIRPB2Q5JXA9 342 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 FAXCQ5TGI0 409 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 CCDC70Q6NSX1 233 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 LYSMD3Q7Z3D4 306 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 TECPR1Q7Z6L1 1165 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 PRUNE1Q86TP1 453 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 RASGEF1CQ8N431 466 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 PRELID2Q8N945 189 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 EID2BQ96D98 161 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 RTP4Q96DX8 246 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 APOL2Q9BQE5 337 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 RTKNQ9BST9 563 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 ERVMER34-1Q9H9K5 563 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 SNX12Q9UMY4 172 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 SHOC2Q9UQ13 582 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF711Q9Y462 761 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 OR1A2Q9Y585 309 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 SPO11Q9Y5K1 396 aa14.11□□□□□ -0.15
PTCH1-226ENST00000553011 ARHGEF17Q96PE2 2063 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-226ENST00000553011 SPTY2D1-AS1A0A0U1RR47 76 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 DCDC2BA2VCK2 349 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF185O15231 689 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 DFNA5O60443 496 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 SLC4A1P02730 911 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ITGAVP06756 1048 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF883P0CG24 379 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 SDHBP21912 280 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 STIP1P31948 543 aaKnown RBP14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ADRA1AP35348 466 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ID4P47928 161 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 KCNJ1P48048 391 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 THOP1P52888 689 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 YPEL5P62699 121 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 BNIP3Q12983 259 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 MTM1Q13496 603 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 SPARCL1Q14515 664 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 PRPSAP1Q14558 356 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 SLC1A5Q15758 541 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 PARP6Q2NL67 630 aa14.1□□□□□ -0.15
PTCH1-226ENST00000553011 ZNF542PQ5EBM4 170 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms