RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 MUSKO15146 869 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 AKR1B10O60218 316 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 NEBLO76041 1014 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 PROSCO94903 275 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 GJC1P36383 396 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 MMP12P39900 470 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 RENBPP51606 427 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 PFN3P60673 137 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 AP1S1P61966 158 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 NSUN2Q08J23 767 aaKnown RBP eCLIP15.5■□□□□ 0.07
BRF1-220ENST00000552127 SLC10A7Q0GE19 358 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 PDE1CQ14123 709 aaPredicted RBP15.5■□□□□ 0.07
BRF1-220ENST00000552127 ZNF235Q14590 738 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 TPRG1LQ5T0D9 272 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 ERAP2Q6P179 960 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 GUSBP11Q6P575 273 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 CPNE8Q86YQ8 564 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 TP53I13Q8NBR0 393 aaPredicted RBP15.5■□□□□ 0.07
BRF1-220ENST00000552127 CENPTQ96BT3 561 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 DUSP23Q9BVJ7 150 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 LCMT1Q9UIC8 334 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 ATP8A1Q9Y2Q0 1164 aa15.5■□□□□ 0.07
BRF1-220ENST00000552127 CCDC187A0A096LP49 1063 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 NEMP2A6NFY4 417 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 H3BM21 787 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 RIOK3O14730 519 aaKnown RBP15.49■□□□□ 0.07
BRF1-220ENST00000552127 CASC3O15234 703 aaKnown RBP15.49■□□□□ 0.07
BRF1-220ENST00000552127 TCEA3O75764 348 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 PEX11BO96011 259 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 CD48P09326 243 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 TMEM253P0C7T8 217 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 NME1P15531 152 aaKnown RBP15.49■□□□□ 0.07
BRF1-220ENST00000552127 HSPA9P38646 679 aaKnown RBP15.49■□□□□ 0.07
BRF1-220ENST00000552127 CASRP41180 1078 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 ARSEP51690 589 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 PDX1P52945 283 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 HNRNPKP61978 463 aaKnown RBP eCLIP15.49■□□□□ 0.07
BRF1-220ENST00000552127 BCL2L1Q07817 233 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 MMRN1Q13201 1228 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 DPYSL3Q14195 570 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 IRF4Q15306 451 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 TSR1Q2NL82 804 aaKnown RBP15.49■□□□□ 0.07
BRF1-220ENST00000552127 ZNF542PQ5EBM4 170 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 EFL1Q7Z2Z2 1120 aaKnown RBP15.49■□□□□ 0.07
BRF1-220ENST00000552127 HTR3CQ8WXA8 447 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 ECHDC3Q96DC8 303 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 COQ6Q9Y2Z9 468 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 PCDHGA7Q9Y5G6 932 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 C2CD3Q4AC94 2353 aa15.49■□□□□ 0.07
BRF1-220ENST00000552127 MFSD11O43934 449 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 MAFKO60675 156 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 CSF2P04141 144 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 IL4RP24394 825 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 MAN1A1P33908 653 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 SCNN1BP51168 640 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 THOP1P52888 689 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 ADKP55263 362 aaKnown RBP15.48■□□□□ 0.07
BRF1-220ENST00000552127 RIPPLY3P57055 190 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 TAS2R40P59535 323 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 YPEL5P62699 121 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 PTK2BQ14289 1009 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 JAMLQ86YT9 394 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 BBS5Q8N3I7 341 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 PAF1Q8N7H5 531 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 ZSCAN1Q8NBB4 408 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 ZNF548Q8NEK5 533 aaPredicted RBP15.48■□□□□ 0.07
BRF1-220ENST00000552127 TPCN2Q8NHX9 752 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 CHP1Q99653 195 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 ZNF670Q9BS34 389 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 MBNL1Q9NR56 388 aaKnown RBP15.48■□□□□ 0.07
BRF1-220ENST00000552127 ACSL6Q9UKU0 697 aa15.48■□□□□ 0.07
BRF1-220ENST00000552127 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.47■□□□□ 0.07
BRF1-220ENST00000552127 TRAFD1O14545 582 aaPredicted RBP15.47■□□□□ 0.07
BRF1-220ENST00000552127 TOR1BO14657 336 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 PRKCGP05129 697 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 KRT7P08729 469 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 LIPCP11150 499 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 LIG3P49916 1009 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 RALGDSQ12967 914 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 EIF2B5Q13144 721 aaKnown RBP15.47■□□□□ 0.07
BRF1-220ENST00000552127 LRRC14Q15048 493 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 PDK2Q15119 407 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 ATP13A4Q4VNC1 1196 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 MANEAQ5SRI9 462 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 NCBP2-AS2Q69YL0 99 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 ZCCHC8Q6NZY4 707 aaKnown RBP15.47■□□□□ 0.07
BRF1-220ENST00000552127 MACC1Q6ZN28 852 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 VASH2Q86V25 355 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 CNGA4Q8IV77 575 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 PGBD5Q8N414 524 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 NSMCE1Q8WV22 266 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 NSMCE3Q96MG7 304 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 NUDCD1Q96RS6 583 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 MGME1Q9BQP7 344 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 ADNPQ9H2P0 1102 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 NHEJ1Q9H9Q4 299 aaPredicted RBP15.47■□□□□ 0.07
BRF1-220ENST00000552127 SPTLC3Q9NUV7 552 aa15.47■□□□□ 0.07
BRF1-220ENST00000552127 TTC24A2A3L6 582 aaPredicted RBP15.46■□□□□ 0.07
BRF1-220ENST00000552127 EME2A4GXA9 379 aaPredicted RBP15.46■□□□□ 0.07
BRF1-220ENST00000552127 CFAP69A5D8W1 941 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms