RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 ATP1A1P05023 1023 aaKnown RBP4.6□□□□□ -1.67
GPN3-209ENST00000551079 G6PDP11413 515 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 COX7A2P14406 83 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 RRM1P23921 792 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 SHMT1P34896 483 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 TMPOP42166 694 aaKnown RBP4.6□□□□□ -1.67
GPN3-209ENST00000551079 GABRB2P47870 512 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 EFNA5P52803 228 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 UFM1P61960 85 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 VAMP2P63027 116 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 GPR68Q15743 365 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 IRAK1BP1Q5VVH5 260 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 PMS2CLQ68D20 193 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 METTL2BQ6P1Q9 378 aaKnown RBP4.6□□□□□ -1.67
GPN3-209ENST00000551079 LCTLQ6UWM7 567 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 CYP26C1Q6V0L0 522 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 SLC36A4Q6YBV0 504 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 TDRPQ86YL5 185 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 FOXRED2Q8IWF2 684 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 ZBTB2Q8N680 514 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 HUS1BQ8NHY5 278 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 METTL2AQ96IZ6 378 aaKnown RBP4.6□□□□□ -1.67
GPN3-209ENST00000551079 UBXN10Q96LJ8 280 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 SH3GL2Q99962 352 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 PSAT1Q9Y617 370 aa4.6□□□□□ -1.67
GPN3-209ENST00000551079 A0A1W2PS18 150 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 TTC36A6NLP5 189 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 C16orf97H3BN30 126 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 P2RY10O00398 339 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 TNPO2O14787 897 aaKnown RBP4.59□□□□□ -1.67
GPN3-209ENST00000551079 TSPAN4O14817 238 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 FGF17O60258 216 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 MAOAP21397 527 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 USP8P40818 1118 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 METAP2P50579 478 aaKnown RBP eCLIP4.59□□□□□ -1.67
GPN3-209ENST00000551079 FUT6P51993 359 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 RPP30P78346 268 aaKnown RBP4.59□□□□□ -1.67
GPN3-209ENST00000551079 SLC20A2Q08357 652 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 KCNT1Q5JUK3 1230 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 RGMBQ6NW40 437 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 KCTD18Q6PI47 426 aaPredicted RBP4.59□□□□□ -1.67
GPN3-209ENST00000551079 FBXO46Q6PJ61 603 aaPredicted RBP4.59□□□□□ -1.67
GPN3-209ENST00000551079 CDCA5Q96FF9 252 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 KLHL15Q96M94 604 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 PLEKHA4Q9H4M7 779 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 LRRC4Q9HBW1 653 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 GPR108Q9NPR9 543 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 MPP6Q9NZW5 540 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 TTC7AQ9ULT0 858 aaPredicted RBP4.59□□□□□ -1.67
GPN3-209ENST00000551079 TBX20Q9UMR3 447 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 A4GNTQ9UNA3 340 aa4.59□□□□□ -1.67
GPN3-209ENST00000551079 PDS5AQ29RF7 1337 aaKnown RBP4.58□□□□□ -1.68
GPN3-209ENST00000551079 SEC14L5O43304 696 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 CYC1P08574 325 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 CDH1P12830 882 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 RELQ04864 619 aaPredicted RBP4.58□□□□□ -1.68
GPN3-209ENST00000551079 TRPC3Q13507 836 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 C2orf68Q2NKX9 166 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 EIF2S3LQ2VIR3 472 aaKnown RBP4.58□□□□□ -1.68
GPN3-209ENST00000551079 SLC45A4Q5BKX6 768 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 WDR63Q8IWG1 891 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 ODF3L1Q8IXM7 274 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 KBTBD3Q8NAB2 608 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 OR13A1Q8NGR1 328 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 USP13Q92995 863 aaPredicted RBP4.58□□□□□ -1.68
GPN3-209ENST00000551079 ZBTB10Q96DT7 871 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 APOPT1Q96IL0 206 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 LBHD1Q9BQE6 289 aaPredicted RBP4.58□□□□□ -1.68
GPN3-209ENST00000551079 NDST4Q9H3R1 872 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 ABCF3Q9NUQ8 709 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 ERVK-11Q9UQG0 969 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 AMDHD2Q9Y303 409 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 ADAM18Q9Y3Q7 739 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 ZNF711Q9Y462 761 aa4.58□□□□□ -1.68
GPN3-209ENST00000551079 UTYO14607 1347 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 ASPDHA6ND91 283 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 HOXB5P09067 269 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 HNRNPA1P09651 372 aaKnown RBP eCLIP4.57□□□□□ -1.68
GPN3-209ENST00000551079 S1PR1P21453 382 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 CNTFP26441 200 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 GGT5P36269 586 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 ARL1P40616 181 aaPredicted RBP4.57□□□□□ -1.68
GPN3-209ENST00000551079 HNRNPH2P55795 449 aaKnown RBP4.57□□□□□ -1.68
GPN3-209ENST00000551079 DMP1Q13316 513 aaPredicted RBP4.57□□□□□ -1.68
GPN3-209ENST00000551079 RBM39Q14498 530 aaKnown RBP4.57□□□□□ -1.68
GPN3-209ENST00000551079 GGNBP1Q5YKI7 109 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 PLEKHA7Q6IQ23 1121 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 TRNP1Q6NT89 227 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 SLC9B2Q86UD5 537 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 RNF113BQ8IZP6 322 aaKnown RBP4.57□□□□□ -1.68
GPN3-209ENST00000551079 SPATA6LQ8N4H0 392 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 METTL27Q8N6F8 245 aaPredicted RBP4.57□□□□□ -1.68
GPN3-209ENST00000551079 IL17RCQ8NAC3 791 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 LRRC8CQ8TDW0 803 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 KLHL29Q96CT2 875 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 KIF1BPQ96EK5 621 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 MPHOSPH8Q99549 860 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 FAM110AQ9BQ89 295 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 KCNN2Q9H2S1 579 aa4.57□□□□□ -1.68
GPN3-209ENST00000551079 PPP1R3EQ9H7J1 279 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms