RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 DUSP22Q9NRW4 184 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 BLOC1S4Q9NUP1 217 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 UTP6Q9NYH9 597 aaKnown RBP3.38□□□□□ -1.87
CCNT1-203ENST00000550457 EURLQ9NYK6 297 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 UVRAGQ9P2Y5 699 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 TUBGCP4Q9UGJ1 667 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 BCAP29Q9UHQ4 241 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 HAO1Q9UJM8 370 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 ANAPC5Q9UJX4 755 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 PACSIN2Q9UNF0 486 aaPredicted RBP3.38□□□□□ -1.87
CCNT1-203ENST00000550457 EXOC7Q9UPT5 735 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 NAALADL1Q9UQQ1 740 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 TRAF3IP3Q9Y228 551 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.38□□□□□ -1.87
CCNT1-203ENST00000550457 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.38□□□□□ -1.87
CCNT1-203ENST00000550457 LRP12Q9Y561 859 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 SQORQ9Y6N5 450 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.38□□□□□ -1.87
CCNT1-203ENST00000550457 FAM205AQ6ZU69 1335 aa3.38□□□□□ -1.87
CCNT1-203ENST00000550457 TNS3Q68CZ2 1445 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 MYH7BA7E2Y1 1941 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 COL1A1P02452 1464 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TJP1Q07157 1748 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 MARF1Q9Y4F3 1742 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 SH3PXD2BA1X283 911 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 E9PBE3 544 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 H0Y3Z8 333 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 H0YJX3 145 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 DCLK1O15075 740 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 PMM2O15305 246 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 P4HA2O15460 535 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 INSIG1O15503 277 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 XPOTO43592 962 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CCNT1O60563 726 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 SPAG7O75391 227 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TM7SF2O76062 418 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 HARSP12081 509 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 UQCRBP14927 111 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ANPEPP15144 967 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF12P17014 697 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ZNF24P17028 368 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 GAP43P17677 238 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ENGP17813 658 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 VCLP18206 1134 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TNFAIP3P21580 790 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ACAT1P24752 427 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 FOXN2P32314 431 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 PHBP35232 272 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CETN2P41208 172 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 SLC1A1P43005 524 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ARFIP2P53365 341 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 NR1H2P55055 460 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 NUP107P57740 925 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 GPC5P78333 572 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 HOXA4Q00056 320 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CDK16Q00536 496 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ZBTB16Q05516 673 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CETN1Q12798 172 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 PTP4A2Q12974 167 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 COASYQ13057 564 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ZBTB17Q13105 803 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 MYBPC2Q14324 1141 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 PCBP2Q15366 365 aaKnown RBP eCLIP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 DLGAP5Q15398 846 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CALCRLQ16602 461 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CLPPQ16740 277 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 LONRF1Q17RB8 773 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 KNOP1Q1ED39 458 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ABCB5Q2M3G0 1257 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 USP41Q3LFD5 358 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 CCDC153Q494R4 210 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ANKRD20A4Q4UJ75 823 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TAF1BQ53T94 588 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ACSBG2Q5FVE4 666 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 DCAF12L1Q5VU92 463 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ARMC3Q5W041 872 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 RWDD4Q6NW29 188 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 PPP1R2P3Q6NXS1 205 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 RHBDF2Q6PJF5 856 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 DHRS4L2Q6PKH6 230 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 PACS1Q6VY07 963 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 NCCRP1Q6ZVX7 275 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ANO5Q75V66 913 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 WDR53Q7Z5U6 358 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 USP37Q86T82 979 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TRABD2AQ86V40 505 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 LRRC6Q86X45 466 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 SLC13A5Q86YT5 568 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 MAP7D3Q8IWC1 876 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 FAM186BQ8IYM0 893 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 SAMD14Q8IZD0 417 aaPredicted RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 SCYL3Q8IZE3 742 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 BBS5Q8N3I7 341 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 MARVELD2Q8N4S9 558 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ZCCHC9Q8N567 271 aaKnown RBP3.37□□□□□ -1.87
CCNT1-203ENST00000550457 ANKRD42Q8N9B4 389 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TERB1Q8NA31 727 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 OR6Y1Q8NGX8 325 aa3.37□□□□□ -1.87
CCNT1-203ENST00000550457 TTC8Q8TAM2 541 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms