RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 POU5F2Q8N7G0 328 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 ST13P5Q8NFI4 369 aaPredicted RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 POMKQ9H5K3 350 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 ASAH2Q9NR71 780 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 POLR3BQ9NW08 1133 aaPredicted RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 APOBEC2Q9Y235 224 aaKnown RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 PLXNA4Q9HCM2 1894 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 E9PBE3 544 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 KLHL41O60662 606 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 CRTAMO95727 393 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 PTPN4P29074 926 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 EID2BQ96D98 161 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 CADM1Q9BY67 442 aaKnown RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 CDH19Q9H159 772 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 TAS2R1Q9NYW7 299 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 GALPQ9UBC7 116 aa20.97■□□□□ 0.95
PRDM4-205ENST00000550376 INTS6Q9UL03 887 aaKnown RBP20.97■□□□□ 0.95
PRDM4-205ENST00000550376 TRAV19A0A0A6YYK7 116 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 COL6A2P12110 1019 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 FPGSQ05932 587 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 PSAPL1Q6NUJ1 521 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 PAF1Q8N7H5 531 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 OR52B2Q96RD2 323 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 CCDC106Q9BWC9 280 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 NLE1Q9NVX2 485 aaPredicted RBP20.96■□□□□ 0.95
PRDM4-205ENST00000550376 PRKAG2Q9UGJ0 569 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 ASB3Q9Y575 518 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 TRANK1O15050 2925 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 A0A087X1B8 175 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 ZBTB14O43829 449 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 ARSAP15289 507 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 EPHB1P54762 984 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 PEX6Q13608 980 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 CBX2Q14781 532 aaPredicted RBP20.96■□□□□ 0.95
PRDM4-205ENST00000550376 TEAD2Q15562 447 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 FAM83EQ2M2I3 478 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 SLC5A9Q2M3M2 681 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 CFAP157Q5JU67 520 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 PPM1LQ5SGD2 360 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 MRNIPQ6NTE8 343 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 MRPL43Q8N983 215 aaKnown RBP20.96■□□□□ 0.95
PRDM4-205ENST00000550376 ANKRD36A6QL64 1941 aa20.96■□□□□ 0.95
PRDM4-205ENST00000550376 LTA4HP09960 611 aaKnown RBP20.95■□□□□ 0.95
PRDM4-205ENST00000550376 EPHA3P29320 983 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 SNCBQ16143 134 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 FBXO48Q5FWF7 155 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 TRIM67Q6ZTA4 783 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 HTR3DQ70Z44 454 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 TMEM25Q86YD3 366 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 ELMOD1Q8N336 334 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.95■□□□□ 0.95
PRDM4-205ENST00000550376 SHKBP1Q8TBC3 707 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 UBXN10Q96LJ8 280 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 MRPL57Q9BQC6 102 aaKnown RBP20.95■□□□□ 0.95
PRDM4-205ENST00000550376 NUF2Q9BZD4 464 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 DRC3Q9H069 523 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 ILKAPQ9H0C8 392 aaPredicted RBP20.95■□□□□ 0.95
PRDM4-205ENST00000550376 LINC00597Q9H2U6 94 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 RETREG1Q9H6L5 497 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 L3MBTL1Q9Y468 752 aa20.95■□□□□ 0.95
PRDM4-205ENST00000550376 C2orf81A6NN90 581 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 GRXCR1A8MXD5 290 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 B2RBV5 119 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 APOA4P06727 396 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 TFEBP19484 476 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 STC1P52823 247 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 TAF1AQ15573 450 aaPredicted RBP20.95■□□□□ 0.94
PRDM4-205ENST00000550376 TECRLQ5HYJ1 363 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 SPDYAQ5MJ70 313 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 CCDC149Q6ZUS6 474 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 RBM23Q86U06 439 aaKnown RBP20.95■□□□□ 0.94
PRDM4-205ENST00000550376 FAM13CQ8NE31 585 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 SREK1Q8WXA9 508 aaKnown RBP20.95■□□□□ 0.94
PRDM4-205ENST00000550376 PTERQ96BW5 349 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 CCDC97Q96F63 343 aaPredicted RBP20.95■□□□□ 0.94
PRDM4-205ENST00000550376 TNFRSF12AQ9NP84 129 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 ABCB8Q9NUT2 735 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 SLC4A7Q9Y6M7 1214 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 EYSQ5T1H1 3165 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 OBSL1O75147 1896 aa20.95■□□□□ 0.94
PRDM4-205ENST00000550376 MEI4A8MW99 385 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 TRIM24O15164 1050 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 GYG2O15488 501 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 SERPINA6P08185 405 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 EPCAMP16422 314 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 BMPR1AP36894 532 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 POLD2P49005 469 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 ERFP50548 548 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 SLC7A9P82251 487 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 PHTF2Q8N3S3 785 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 DNAJC5GQ8N7S2 189 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 INPP5DQ92835 1189 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 BTBD10Q9BSF8 475 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 ADGRE3Q9BY15 652 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 DNMT3BQ9UBC3 853 aaKnown RBP20.94■□□□□ 0.94
PRDM4-205ENST00000550376 LOC100653049A0A140TA62 436 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 KRT34O76011 436 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 MC4RP32245 332 aa20.94■□□□□ 0.94
PRDM4-205ENST00000550376 PDCD2Q16342 344 aaPredicted RBP20.94■□□□□ 0.94
PRDM4-205ENST00000550376 ZRANB3Q5FWF4 1079 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms