RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 TPRG1LQ5T0D9 272 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ERMARDQ5T6L9 678 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 FBXL19Q6PCT2 694 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 GDPD4Q6W3E5 623 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KYAT3Q6YP21 454 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 MARCH9Q86YJ5 346 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 JAMLQ86YT9 394 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 PSTKQ8IV42 348 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SLC25A45Q8N413 288 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 LILRB2Q8N423 598 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 NPWQ8N729 165 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ASB12Q8WXK4 309 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 RAB7BQ96AH8 199 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ZNF653Q96CK0 615 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KLHDC7BQ96G42 594 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 GDAP1L1Q96MZ0 367 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KLHL32Q96NJ5 620 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 LENG8Q96PV6 779 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ARPC5LQ9BPX5 153 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 OSBPL1AQ9BXW6 950 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SLC17A9Q9BYT1 436 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 CPEB1Q9BZB8 566 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 GSX2Q9BZM3 304 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SLC39A8Q9C0K1 460 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 DHX35Q9H5Z1 703 aaKnown RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 DKK3Q9UBP4 350 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 FTSJ1Q9UET6 329 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 PCSK1NQ9UHG2 260 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 FOXD3Q9UJU5 478 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-208ENST00000549537 CAPN11Q9UMQ6 739 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 ITM2BQ9Y287 266 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 PCDHGA1Q9Y5H4 931 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 HS3ST3A1Q9Y663 406 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SCINQ9Y6U3 715 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 TRPM6Q9BX84 2022 aa6.72□□□□□ -1.33
TMEM116-208ENST00000549537 SPTA1P02549 2419 aa6.71□□□□□ -1.33
TMEM116-208ENST00000549537 URB1O60287 2271 aaKnown RBP6.71□□□□□ -1.33
TMEM116-208ENST00000549537 LRRK1Q38SD2 2015 aa6.71□□□□□ -1.33
TMEM116-208ENST00000549537 A0A087X0T9 212 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 SPTY2D1-AS1A0A0U1RR47 76 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 IGLON5A6NGN9 336 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 A6NNZ2 444 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 EEF2KO00418 725 aaKnown RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 TRIM38O00635 465 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ENC1O14682 589 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 KLF4O43474 513 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 TSPAN6O43657 245 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 PRPSAP2O60256 369 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 BUB1BO60566 1050 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 LDOC1O95751 146 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 IGSF6O95976 241 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 PAK4O96013 591 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 SERPING1P05155 500 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 CYP1A2P05177 515 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ITGAVP06756 1048 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 FAM228BP0C875 321 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ERCC2P18074 760 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ITIH2P19823 946 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 DGKAP23743 735 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 HNRNPH3P31942 346 aaKnown RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 RGRP47804 291 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 CSNK1DP48730 415 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 HCAR3P49019 387 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 CDKN1CP49918 316 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 PAPOLAP51003 745 aaKnown RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 UBASH3AP57075 661 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 PFN3P60673 137 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 RHOAP61586 193 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 DNAJC3Q13217 504 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 FZD2Q14332 565 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 DPYSL2Q16555 572 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 LRRC73Q5JTD7 316 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 TXNRD3NBQ6F5E7 133 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 DHRS13Q6UX07 377 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 KDM7AQ6ZMT4 941 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ARHGAP36Q6ZRI8 547 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 Q6ZSR6 202 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 RFX8Q6ZV50 586 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ZSCAN30Q86W11 494 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ZSWIM9Q86XI8 627 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 TP53INP2Q8IXH6 220 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 RYBPQ8N488 228 aaPredicted RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 EID2Q8N6I1 236 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 NIPA2Q8N8Q9 360 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 DENND6BQ8NEG7 585 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 HCAR2Q8TDS4 363 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ZCCHC14Q8WYQ9 949 aaKnown RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 RELTQ969Z4 430 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 CENPTQ96BT3 561 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 ARHGEF26Q96DR7 871 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 CELF6Q96J87 481 aaKnown RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 FEM1CQ96JP0 617 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 EXOC2Q96KP1 924 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 CNDP2Q96KP4 475 aaKnown RBP6.71□□□□□ -1.34
TMEM116-208ENST00000549537 NSMCE3Q96MG7 304 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 THAP2Q9H0W7 228 aa6.71□□□□□ -1.34
TMEM116-208ENST00000549537 UCKL1Q9NWZ5 548 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms