RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 NT5MQ9NPB1 228 aa14.16□□□□□ -0.14
RAPGEF3-218ENST00000548919 CIDEBQ9UHD4 219 aa14.16□□□□□ -0.14
RAPGEF3-218ENST00000548919 OAZ3Q9UMX2 235 aa14.16□□□□□ -0.14
RAPGEF3-218ENST00000548919 TDRKHQ9Y2W6 561 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-218ENST00000548919 SQORQ9Y6N5 450 aa14.16□□□□□ -0.14
RAPGEF3-218ENST00000548919 RNF103-CHMP3A0A140T963 221 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 A0A1B0GTL3 188 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 PIP5K1BO14986 540 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 BMP10O95393 424 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 MT-ND1P03886 318 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 ZNF135P52742 658 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 PTPRCAPQ14761 206 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 TIGD5Q53EQ6 642 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 KDELC1Q6UW63 502 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 KIAA0408Q6ZU52 694 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 TFAP2DQ7Z6R9 452 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 SLC22A9Q8IVM8 553 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 CMTR2Q8IYT2 770 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 PCYOX1LQ8NBM8 494 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 HM13Q8TCT9 377 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 CASP10Q92851 521 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 GPATCH1Q9BRR8 931 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 ADI1Q9BV57 179 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 PRKD2Q9BZL6 878 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 MID1IP1Q9NPA3 183 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 CMTM6Q9NX76 183 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 CDH9Q9ULB4 789 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 FAF1Q9UNN5 650 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 BTRCQ9Y297 605 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 PTCH2Q9Y6C5 1203 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 ZFC3H1O60293 1989 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 FXYD1O00168 92 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 PDHXO00330 501 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 IRAK2O43187 625 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 GJB3O75712 270 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 SERPINH1P50454 418 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 TUBA4AP68366 448 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 HACD2Q6Y1H2 254 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 NPLOC4Q8TAT6 608 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 C12orf43Q96C57 262 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 ABHD16BQ9H3Z7 469 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 AGPAT4Q9NRZ5 378 aa14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 POLR3BQ9NW08 1133 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-218ENST00000548919 J3KR12 359 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 UBXN8O00124 270 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CAPN15O75808 1086 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CDK14O94921 469 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 LINC00032P0C843 101 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CES1P23141 567 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ACADVLP49748 655 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ADAM17P78536 824 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 BEX3Q00994 111 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 MERTKQ12866 999 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 GPR142Q7Z601 462 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CCDC117Q8IWD4 279 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 TMEM86AQ8N2M4 240 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 PTGR2Q8N8N7 351 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ROPN1LQ96C74 230 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CATSPERBQ9H7T0 1116 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CSNK1G1Q9HCP0 422 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 GMEB1Q9Y692 573 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 UNCXA6NJT0 531 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ANGPT2O15123 496 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 S1PR4O95977 384 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 IGLV3-25P01717 112 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 NCK1P16333 377 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 SCNN1GP51170 649 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 HERVK_113P63132 956 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ECT2LQ008S8 904 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 DSC2Q02487 901 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 SLC10A7Q0GE19 358 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 C16orf72Q14CZ0 275 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 PFKFB4Q16877 469 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ANKDD1AQ495B1 522 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CHST15Q7LFX5 561 aaPredicted RBP14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 LRRTM3Q86VH5 581 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 CAMK1DQ8IU85 385 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 TWIST2Q8WVJ9 160 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 TSPAN17Q96FV3 270 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ERVK-6Q9BXR3 956 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 TUBB1Q9H4B7 451 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 RGS18Q9NS28 235 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 MRGBPQ9NV56 204 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 V9GYQ6 96 aa14.14□□□□□ -0.15
RAPGEF3-218ENST00000548919 ATE1O95260 518 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 THP07101 528 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 SLC6A2P23975 617 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 CRYBB1P53674 252 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 ESRRGP62508 458 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 GALNT1Q10472 559 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 OR4D1Q15615 310 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 SLC14A2Q15849 920 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 MANEALQ5VSG8 457 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 IQSEC1Q6DN90 963 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 GPR180Q86V85 440 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 CLYBLQ8N0X4 340 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 DNAJB14Q8TBM8 379 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 CALML6Q8TD86 181 aa14.13□□□□□ -0.15
RAPGEF3-218ENST00000548919 PABPC5Q96DU9 382 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms