RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PRSS38A1L453 326 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 NPIPB15A6NHN6 443 aaPredicted RBP17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 B4DGG1 531 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 TNFSF15O95150 251 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 MMP13P45452 471 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 CDH6P55285 790 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 FANCCQ00597 558 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 RALGPS1Q5JS13 557 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 OGFOD3Q6PK18 319 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 TAF8Q7Z7C8 310 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 HEATR4Q86WZ0 1026 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 CCNJLQ8IV13 435 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 ARL14Q8N4G2 192 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 DTD2Q96FN9 168 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 FOXP3Q9BZS1 431 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 LRRN3Q9H3W5 708 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 CYP4F12Q9HCS2 524 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 APPL1Q9UKG1 709 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 BZW2Q9Y6E2 419 aaKnown RBP17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 ZNF462Q96JM2 2506 aa17.41■□□□□ 0.38
CHMP1A-205ENST00000548650 COL6A6A6NMZ7 2263 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 A0A087X0T9 212 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 SYCE3A1L190 88 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 ERVH48-1M5A8F1 160 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 PLD2O14939 933 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 MFSD11O43934 449 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 PGLSO95336 258 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 SERPING1P05155 500 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 CYP1A2P05177 515 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 CD48P09326 243 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 FAM228BP0C875 321 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 CCKBRP32239 447 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 ETV3P41162 512 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 INHBCP55103 352 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 EIF3IQ13347 325 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 HLTFQ14527 1009 aaKnown RBP eCLIP17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 PTPRRQ15256 657 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 C14orf28Q4W4Y0 310 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 ARHGAP40Q5TG30 622 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 SPECC1LQ69YQ0 1117 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 HSD11B1LQ7Z5J1 315 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 SPRED1Q7Z699 444 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 CBARPQ8N350 705 aaPredicted RBP17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 BBS5Q8N3I7 341 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 FAM46DQ8NEK8 389 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 FAM71BQ8TC56 605 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 SNRNP27Q8WVK2 155 aaKnown RBP17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 RCOR3Q9P2K3 495 aaPredicted RBP17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 IP6K2Q9UHH9 426 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 RNF215Q9Y6U7 377 aa17.4■□□□□ 0.38
CHMP1A-205ENST00000548650 PSMD11O00231 422 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 PDE2AO00408 941 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 CYP2A6P11509 494 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 PNLIPP16233 465 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 GLB1P16278 677 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 IL4RP24394 825 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 ZBED6P86452 979 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 MMRN1Q13201 1228 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 CLN3Q13286 438 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 KRT81Q14533 505 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 TSR1Q2NL82 804 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 MARC1Q5VT66 337 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 DENND2CQ68D51 928 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 RAB11FIP2Q7L804 512 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 TSPAN33Q86UF1 283 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 CPNE8Q86YQ8 564 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 TEX26Q8N6G2 289 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 PTCD2Q8WV60 388 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 CCDC97Q96F63 343 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 FRMD8Q9BZ67 464 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 CARS2Q9HA77 564 aaKnown RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 PHPT1Q9NRX4 125 aaPredicted RBP17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 KCTD5Q9NXV2 234 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 PHTF1Q9UMS5 762 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 PCDHGA7Q9Y5G6 932 aa17.39■□□□□ 0.37
CHMP1A-205ENST00000548650 NUDT21O43809 227 aaKnown RBP17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 FZD6O60353 706 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 FUCA1P04066 466 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 GYPCP04921 128 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 CEACAM5P06731 702 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 HGFP14210 728 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 NFKBIAP25963 317 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 TEAD1P28347 426 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 UGT1A5P35504 534 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 ARSEP51690 589 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 CDK3Q00526 305 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 RHDQ02161 417 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 VAC14Q08AM6 782 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 C19orf57Q0VDD7 668 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 GALNT2Q10471 571 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 ARMC12Q5T9G4 340 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 NCBP2-AS2Q69YL0 99 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 ALG1LQ6GMV1 187 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 Q6ZVL8 140 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 USP45Q70EL2 814 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 NRROSQ86YC3 692 aa17.38■□□□□ 0.37
CHMP1A-205ENST00000548650 Q8N9G6 341 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms