RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 TTC31Q49AM3 519 aaPredicted RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 KIAA0930Q6ICG6 404 aaPredicted RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 OR4K2Q8NGD2 314 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 OR13C4Q8NGS5 318 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 FBF1Q8TES7 1133 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 DNAJC1Q96KC8 554 aaKnown RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 CHRDQ9H2X0 955 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 MFSD1Q9H3U5 465 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 NLE1Q9NVX2 485 aaPredicted RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 SIT1Q9Y3P8 196 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 PKP3Q9Y446 797 aa28.79■■■□□ 2.2
BRF1-213ENST00000548421 ZNF106Q9H2Y7 1883 aaKnown RBP28.79■■■□□ 2.2
BRF1-213ENST00000548421 A0A1W2PP55 124 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 AREL1O15033 823 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 STX7O15400 261 aaKnown RBP28.78■■■□□ 2.2
BRF1-213ENST00000548421 NDUFV2P19404 249 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 LONRF1Q17RB8 773 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 AGBL4Q5VU57 503 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 CYS1Q717R9 158 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 PBXIP1Q96AQ6 731 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 EID2BQ96D98 161 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 CERS2Q96G23 380 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 OMDQ99983 421 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 C19orf43Q9BQ61 176 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 MOCS1Q9NZB8 636 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 IL17CQ9P0M4 197 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 SPINT1O43278 529 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 DCXO43602 365 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 RNASEH2AO75792 299 aaKnown RBP28.78■■■□□ 2.2
BRF1-213ENST00000548421 GABRG2P18507 467 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 PSMA3P25788 255 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 HADHAP40939 763 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 SFSWAPQ12872 951 aaKnown RBP28.78■■■□□ 2.2
BRF1-213ENST00000548421 RALGDSQ12967 914 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 PTPRCAPQ14761 206 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 TRMT10BQ6PF06 316 aaKnown RBP28.78■■■□□ 2.2
BRF1-213ENST00000548421 FBXL12Q9NXK8 326 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 SERGEFQ9UGK8 458 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 ITM2BQ9Y287 266 aa28.78■■■□□ 2.2
BRF1-213ENST00000548421 RPP40O75818 363 aaKnown RBP28.77■■■□□ 2.2
BRF1-213ENST00000548421 ACADMP11310 421 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 TMPRSS15P98073 1019 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 PTSQ03393 145 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 ZNF449Q6P9G9 518 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 KIAA1324Q6UXG2 1013 aaKnown RBP28.77■■■□□ 2.2
BRF1-213ENST00000548421 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP28.77■■■□□ 2.2
BRF1-213ENST00000548421 GANCQ8TET4 914 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 FAM131CQ96AQ9 280 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 ACSS3Q9H6R3 686 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 PPANQ9NQ55 473 aaKnown RBP28.77■■■□□ 2.2
BRF1-213ENST00000548421 C20orf96Q9NUD7 363 aaPredicted RBP28.77■■■□□ 2.2
BRF1-213ENST00000548421 ZNF446Q9NWS9 450 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 RABGEF1Q9UJ41 708 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 PLAAQ9Y263 795 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 FADS3Q9Y5Q0 445 aa28.77■■■□□ 2.2
BRF1-213ENST00000548421 BDP1A6H8Y1 2624 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 H0Y858 1186 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 VAPBO95292 243 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 STC1P52823 247 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 PRAMEP78395 509 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 PDPK2PQ6A1A2 396 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 UNC5BQ8IZJ1 945 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 IQCKQ8N0W5 287 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 SPEM1Q8N4L4 309 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 HMGB4Q8WW32 186 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 BPIFA1Q9NP55 256 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 C2orf42Q9NWW7 574 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 GGT7Q9UJ14 662 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 LRRK1Q38SD2 2015 aa28.76■■■□□ 2.19
BRF1-213ENST00000548421 NEMP1O14524 444 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 AP1G1O43747 822 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 SHBGP04278 402 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 ELFN1P0C7U0 828 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 ARNTP27540 789 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 ARCN1P48444 511 aaKnown RBP28.75■■■□□ 2.19
BRF1-213ENST00000548421 ARSDP51689 593 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 STAT4Q14765 748 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 KLHL38Q2WGJ6 581 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 USP30Q70CQ3 517 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 KBTBD6Q86V97 674 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 KCNMB4Q86W47 210 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 TSTD1Q8NFU3 115 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 HDAC10Q969S8 669 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 CDKN2AIPNLQ96HQ2 116 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 TBATAQ96M53 351 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 CYTH2Q99418 400 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 CCDC77Q9BR77 488 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 IER2Q9BTL4 223 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 VIPAS39Q9H9C1 493 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 IL1RAPL1Q9NZN1 696 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 FZD4Q9ULV1 537 aa28.75■■■□□ 2.19
BRF1-213ENST00000548421 CCL22O00626 93 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 SLC7A4O43246 635 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 C1SP09871 688 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 MGAT5Q09328 741 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 TMEM52BQ4KMG9 183 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 ALS2CLQ60I27 953 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 CDKL2Q92772 493 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 ZIM3Q96PE6 472 aa28.74■■■□□ 2.19
BRF1-213ENST00000548421 NCKAP1Q9Y2A7 1128 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms