RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 GAGE12GP0CL81 117 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 GAGE12IP0CL82 117 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 STX2P32856 288 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 NLRP5P59047 1200 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 GAGE1Q13065 139 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 GAGE4Q13068 117 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 NEDD9Q14511 834 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 OASLQ15646 514 aaKnown RBP2.31□□□□□ -2.04
CEP290-204ENST00000547926 BAK1Q16611 211 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 ALG11Q2TAA5 492 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 WBP2NLQ6ICG8 309 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 SMC5Q8IY18 1101 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 SMAP1Q8IYB5 467 aaPredicted RBP2.31□□□□□ -2.04
CEP290-204ENST00000547926 HUS1BQ8NHY5 278 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 KLHL29Q96CT2 875 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 RRP36Q96EU6 259 aaKnown RBP2.31□□□□□ -2.04
CEP290-204ENST00000547926 KXD1Q9BQD3 176 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 EIF2AK1Q9BQI3 630 aaKnown RBP2.31□□□□□ -2.04
CEP290-204ENST00000547926 MMTAG2Q9BU76 263 aaKnown RBP2.31□□□□□ -2.04
CEP290-204ENST00000547926 CNGB3Q9NQW8 809 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 PCDHB16Q9NRJ7 776 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 FBXO9Q9UK97 447 aaPredicted RBP2.31□□□□□ -2.04
CEP290-204ENST00000547926 GJD2Q9UKL4 321 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 SARDHQ9UL12 918 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 CRYL1Q9Y2S2 319 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 CYP46A1Q9Y6A2 500 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 SCINQ9Y6U3 715 aa2.31□□□□□ -2.04
CEP290-204ENST00000547926 TMEM202A6NGA9 273 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 HNRNPCL2B2RXH8 293 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SEC14L5O43304 696 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 EIF3JO75822 258 aaKnown RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 F9P00740 461 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 DDIT3P35638 169 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SORDQ00796 357 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 POU5F1BQ06416 359 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 PTP4A2Q12974 167 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ZBTB17Q13105 803 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 COL28A1Q2UY09 1125 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ATP13A5Q4VNC0 1218 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SLC45A4Q5BKX6 768 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 PPP6R3Q5H9R7 873 aaPredicted RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 SLC36A4Q6YBV0 504 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 LINGO2Q7L985 606 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 HAPLN4Q86UW8 402 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ODF3L1Q8IXM7 274 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 RFLNBQ8N5W9 214 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 DBF4BQ8NFT6 615 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 OR2AK2Q8NG84 335 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 H2AFJQ9BTM1 129 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 AGXT2Q9BYV1 514 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 PAIP1Q9H074 479 aaKnown RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 USP44Q9H0E7 712 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 CSTL1Q9H114 145 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 VEZTQ9HBM0 779 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 GPR108Q9NPR9 543 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 PPP1R14DQ9NXH3 145 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SMARCAL1Q9NZC9 954 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ZNF224Q9NZL3 707 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 KCND2Q9NZV8 630 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 MPP6Q9NZW5 540 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SIX4Q9UIU6 781 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ARHGAP26Q9UNA1 814 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 A4GNTQ9UNA3 340 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 TAF4O00268 1085 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 TSPAN4O14817 238 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 RFPL2O75678 378 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SRCP12931 536 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 PAFAH1B1P43034 410 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 GNAQP50148 359 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ZNF132P52740 706 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 TNFAIP1Q13829 316 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 NAA35Q5VZE5 725 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 SLC46A3Q7Z3Q1 461 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 CHERPQ8IWX8 916 aaKnown RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 KBTBD3Q8NAB2 608 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 POC1AQ8NBT0 407 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 CADM4Q8NFZ8 388 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 DUSP19Q8WTR2 217 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 NOC3LQ8WTT2 800 aaKnown RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 ZNF385AQ96PM9 386 aaKnown RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 PPP1R3EQ9H7J1 279 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 C17orf75Q9HAS0 396 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 MMP25Q9NPA2 562 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 WASH6PQ9NQA3 447 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 PDP2Q9P2J9 529 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 CAMK2AQ9UQM7 478 aa2.3□□□□□ -2.04
CEP290-204ENST00000547926 ATXN2Q99700 1313 aaKnown RBP2.3□□□□□ -2.04
CEP290-204ENST00000547926 PDS5AQ29RF7 1337 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 IGHV4OR15-8A0A075B7B6 117 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 A0A0G2JPF8 293 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 HNRNPCL3B7ZW38 293 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 TGFB1I1O43294 461 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 XPNPEP2O43895 674 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 HNRNPCL1O60812 293 aaKnown RBP2.29□□□□□ -2.04
CEP290-204ENST00000547926 FTCDO95954 541 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 AGR2O95994 175 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 HNRNPCL4P0DMR1 293 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 XBP1P17861 261 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 CD58P19256 250 aa2.29□□□□□ -2.04
CEP290-204ENST00000547926 AZU1P20160 251 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms