RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 USP43Q70EL4 1123 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 PID1Q7Z2X4 250 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 R3HCC1LQ7Z5L2 792 aaKnown RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 RETREG3Q86VR2 466 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 ZNF567Q8N184 647 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SCML4Q8N228 414 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 GABPB2Q8TAK5 448 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 TRIB2Q92519 343 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SGCDQ92629 289 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 NXNL1Q96CM4 212 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 HDAC11Q96DB2 347 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 IL12RB2Q99665 862 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 MCMBPQ9BTE3 642 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 MRPL4Q9BYD3 311 aaKnown RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 OSBPL2Q9H1P3 480 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 FAM49BQ9NUQ9 324 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 ENPP5Q9UJA9 477 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 TSPAN16Q9UKR8 245 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 ACOT9Q9Y305 439 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 TRIP11Q15643 1979 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 DOCK5Q9H7D0 1870 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 C16orf96A6NNT2 1141 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 RGS13O14921 159 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 MFSD11O43934 449 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 MT-CO1P00395 513 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 CRHBPP24387 322 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SHMT2P34897 504 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 VEGFBP49765 207 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 CBX2Q14781 532 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SKIV2LQ15477 1246 aaKnown RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 OTUD3Q5T2D3 398 aaPredicted RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SMYD5Q6GMV2 418 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 RNF19BQ6ZMZ0 732 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 LINC00299Q6ZSB3 139 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 FAM35AQ86V20 835 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 ZC3HC1Q86WB0 502 aaKnown RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 ARMC8Q8IUR7 673 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SLC41A1Q8IVJ1 513 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 SCUBE3Q8IX30 993 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 TMEM130Q8N3G9 435 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 TXNDC5Q8NBS9 432 aaKnown RBP10.72□□□□□ -0.69
NPAS3-205ENST00000547068 LEMD2Q8NC56 503 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 MROH8Q9H579 483 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 CHRAC1Q9NRG0 131 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 ABCD2Q9UBJ2 740 aa10.72□□□□□ -0.69
NPAS3-205ENST00000547068 CA12O43570 354 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 ASNA1O43681 348 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 PEX10O60683 326 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 GUCY1B2O75343 617 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
NPAS3-205ENST00000547068 LDLRP01130 860 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 NR3C2P08235 984 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 MTHFD1P11586 935 aaKnown RBP10.71□□□□□ -0.69
NPAS3-205ENST00000547068 BMP4P12644 408 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 NAT1P18440 290 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 CYP3A5P20815 502 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 YWHAQP27348 245 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 BMPR1AP36894 532 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 ARL4AP40617 200 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 HTRA3P83110 453 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 SLC6A3Q01959 620 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 CAPRIN1Q14444 709 aaKnown RBP10.71□□□□□ -0.69
NPAS3-205ENST00000547068 ZNF460Q14592 562 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 PSMD5Q16401 504 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 CTF1Q16619 201 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 FAM110CQ1W6H9 321 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 RBM48Q5RL73 367 aaKnown RBP10.71□□□□□ -0.69
NPAS3-205ENST00000547068 PRMT9Q6P2P2 845 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 TBPL2Q6SJ96 375 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 VSIG10LQ86VR7 867 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 FUNDC1Q8IVP5 155 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 ELMOD1Q8N336 334 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 MFSD4AQ8N468 514 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 NAT16Q8N8M0 369 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 CPB2Q96IY4 423 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 TXNDC15Q96J42 360 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 OSBPL10Q9BXB5 764 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 MRPL46Q9H2W6 279 aaKnown RBP10.71□□□□□ -0.69
NPAS3-205ENST00000547068 RHOJQ9H4E5 214 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.71□□□□□ -0.69
NPAS3-205ENST00000547068 MAP10Q9P2G4 905 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 CPA4Q9UI42 421 aa10.71□□□□□ -0.69
NPAS3-205ENST00000547068 ZFC3H1O60293 1989 aaKnown RBP10.71□□□□□ -0.7
NPAS3-205ENST00000547068 KIAA1217Q5T5P2 1943 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 ATP6AP2A0A1C7CYW4 349 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 BBIP1A8MTZ0 92 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 M0R3G1 203 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 NR5A2O00482 541 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 MSCO60682 206 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 ATP6AP2O75787 350 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 MT-ND1P03886 318 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 POLR2EP19388 210 aaKnown RBP10.71□□□□□ -0.7
NPAS3-205ENST00000547068 ECT2LQ008S8 904 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 E2F2Q14209 437 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 FAM209AQ5JX71 171 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 CERCAMQ5T4B2 595 aa10.71□□□□□ -0.7
NPAS3-205ENST00000547068 PPP2R2DQ66LE6 453 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms