RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 FUT8Q9BYC5 575 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 PPCSQ9HAB8 311 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 TREX1Q9NSU2 369 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 FBXL12Q9NXK8 326 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 PKD2L2Q9NZM6 624 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 IL17CQ9P0M4 197 aa15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 BCCIPQ9P287 314 aaKnown RBP eCLIP15.85■□□□□ 0.13
TRAFD1-203ENST00000547063 ZCWPW2A0A1B0GU75 182 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 A0A1W2PP55 124 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 RPP40O75818 363 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CLDN7O95471 211 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 ELFN1P0C7U0 828 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 GABRG2P18507 467 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 NDUFV2P19404 249 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 NMBRP28336 390 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 SSTR1P30872 391 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 EIF3BP55884 814 aaKnown RBP15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 GPX6P59796 221 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 SLC29A2Q14542 456 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 STAT4Q14765 748 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CNGA3Q16281 694 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CDKN3Q16667 212 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 PIP5KL1Q5T9C9 394 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CAPN12Q6ZSI9 719 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 LMNTD2Q8IXW0 634 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 PGBD3Q8N328 593 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CBARPQ8N350 705 aaPredicted RBP15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 OR4K2Q8NGD2 314 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CALML6Q8TD86 181 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CXorf40AQ8TE69 158 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 HMGB4Q8WW32 186 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 FAM131CQ96AQ9 280 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 PKNOX2Q96KN3 472 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 CYTH2Q99418 400 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 KDM4CQ9H3R0 1056 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 APPL1Q9UKG1 709 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 MYLKQ15746 1914 aa15.84■□□□□ 0.13
TRAFD1-203ENST00000547063 SPTBN5Q9NRC6 3674 aaKnown RBP15.83■□□□□ 0.13
TRAFD1-203ENST00000547063 TCRBV9S1A1TA0A576 114 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 H7C0S8 307 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 APBB3O95704 486 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 SLC4A1P02730 911 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 IVLP07476 585 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 NUDT17P0C025 328 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 CCR3P51677 355 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 STC1P52823 247 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 METAP1P53582 386 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 MGAT5Q09328 741 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 NAB1Q13506 487 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 THOC5Q13769 683 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 GAS6Q14393 721 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 CASP8Q14790 479 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 KLHL38Q2WGJ6 581 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 LRRC73Q5JTD7 316 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 AGBL4Q5VU57 503 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 ALS2CLQ60I27 953 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 ESRP1Q6NXG1 681 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 NEK5Q6P3R8 708 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 LIPIQ6XZB0 460 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 CROCCP2Q86T23 111 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 CACUL1Q86Y37 369 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 CERS2Q96G23 380 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 SGSM3Q96HU1 749 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 DNAJC1Q96KC8 554 aaKnown RBP15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 ZNF778Q96MU6 729 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 PLEKHG4BQ96PX9 1271 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 FAM167BQ9BTA0 163 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 ACSS3Q9H6R3 686 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 VIPAS39Q9H9C1 493 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 PREBQ9HCU5 417 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 C20orf96Q9NUD7 363 aaPredicted RBP15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 POLR3BQ9NW08 1133 aaPredicted RBP15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 NSMCE4AQ9NXX6 385 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 MOCS1Q9NZB8 636 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 FADS3Q9Y5Q0 445 aa15.83■□□□□ 0.12
TRAFD1-203ENST00000547063 CCDC78A2IDD5 438 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 A8MX80 341 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 AURKAO14965 403 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 PLRG1O43660 514 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 ZNF217O75362 1048 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 VAPBO95292 243 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 AOC1P19801 751 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 LHCGRP22888 699 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 OXTRP30559 389 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 CXCL12P48061 93 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 CLCN5P51795 746 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 PTSQ03393 145 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 IFFO1Q0D2I5 559 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 ILF2Q12905 390 aaKnown RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 RALGDSQ12967 914 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 UAP1Q16222 522 aaPredicted RBP15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 AFTPHQ6ULP2 937 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 CES3Q6UWW8 571 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 TSPAN33Q86UF1 283 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 KCNMB4Q86W47 210 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 NRSN1Q8IZ57 195 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 OR13C4Q8NGS5 318 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 OR13J1Q8NGT2 312 aa15.82■□□□□ 0.12
TRAFD1-203ENST00000547063 OR6P1Q8NGX9 317 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms