RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 FGF1P05230 155 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 THEGLP0DJG4 465 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 PSMB4P28070 264 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 ACTN2P35609 894 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 FDFT1P37268 417 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 RXRGP48443 463 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 STC1P52823 247 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 ATXN3P54252 364 aaPredicted RBP14.48□□□□□ -0.09
DDX54-203ENST00000546869 ETF1P62495 437 aaKnown RBP14.48□□□□□ -0.09
DDX54-203ENST00000546869 SEMG2Q02383 582 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 MTM1Q13496 603 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 ACOX1Q15067 660 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 PCSK7Q16549 785 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 ESRP1Q6NXG1 681 aaKnown RBP14.48□□□□□ -0.09
DDX54-203ENST00000546869 DBX2Q6ZNG2 339 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 Q6ZSR6 202 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 HSD11B1LQ7Z5J1 315 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 TMC3Q7Z5M5 1100 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 TSPAN33Q86UF1 283 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 OXR1Q8N573 874 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 CCHCR1Q8TD31 782 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 LRRC45Q96CN5 670 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 DTD2Q96FN9 168 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 MS4A14Q96JA4 679 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 CDH19Q9H159 772 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 FZD3Q9NPG1 666 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 GDF3Q9NR23 364 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 MBNL1Q9NR56 388 aaKnown RBP14.48□□□□□ -0.09
DDX54-203ENST00000546869 HACD3Q9P035 362 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 PAK5Q9P286 719 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 RNF14Q9UBS8 474 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 FEZ2Q9UHY8 353 aaPredicted RBP14.48□□□□□ -0.09
DDX54-203ENST00000546869 COQ6Q9Y2Z9 468 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 PCDHGB2Q9Y5G2 931 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 SNX11Q9Y5W9 270 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 SAR1BQ9Y6B6 198 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 CACNA1EQ15878 2313 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 TRPM6Q9BX84 2022 aa14.48□□□□□ -0.09
DDX54-203ENST00000546869 ANKRD36A6QL64 1941 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 SPTY2D1-AS1A0A0U1RR47 76 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 A8MX80 341 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 H0Y8X5 98 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 YKT6O15498 198 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 GDF9O60383 454 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 CLDN7O95471 211 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 PYGLP06737 847 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 IGFALSP35858 605 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 CLDN2P57739 230 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 SNX1Q13596 522 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 PTK2BQ14289 1009 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 GALNT3Q14435 633 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 PTPRRQ15256 657 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 SIRPB2Q5JXA9 342 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 STPG1Q5TH74 334 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 KDELC2Q7Z4H8 507 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 SPATS2Q86XZ4 545 aaKnown RBP14.47□□□□□ -0.09
DDX54-203ENST00000546869 MINDY1Q8N5J2 469 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 IPMKQ8NFU5 416 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 OR13H1Q8NG92 308 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 DTX3LQ8TDB6 740 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 ELF4Q99607 663 aaPredicted RBP14.47□□□□□ -0.09
DDX54-203ENST00000546869 C19orf43Q9BQ61 176 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 FSD1LQ9BXM9 530 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 GAREM1Q9H706 876 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 LRRC40Q9H9A6 602 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 ZFYVE1Q9HBF4 777 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 RAD18Q9NS91 495 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 CA5BQ9Y2D0 317 aa14.47□□□□□ -0.09
DDX54-203ENST00000546869 C1orf232A0A0U1RR37 186 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 A0A1B0GTQ1 180 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.46□□□□□ -0.09
DDX54-203ENST00000546869 SLC30A4O14863 429 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 TM4SF5O14894 197 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 PCDHGA12O60330 932 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 AP2A1O95782 977 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 AGTP01019 485 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 IFNB1P01574 187 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 TUBB4AP04350 444 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 C1SP09871 688 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 TSHRP16473 764 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 HMGCLP35914 325 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 ETV3P41162 512 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 MSLNQ13421 630 aaPredicted RBP14.46□□□□□ -0.09
DDX54-203ENST00000546869 INPP5AQ14642 412 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 IRF4Q15306 451 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 PNCKQ6P2M8 343 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 Q6ZVL8 140 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 LINC00523Q86TU6 105 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 CREG2Q8IUH2 290 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 SLC22A18ASQ8N1D0 253 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 CCDC89Q8N998 374 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 EID2BQ96D98 161 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 NUS1Q96E22 293 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 SMIM14Q96QK8 99 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 MYOCQ99972 504 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 GTPBP2Q9BX10 602 aaKnown RBP14.46□□□□□ -0.09
DDX54-203ENST00000546869 FSCN3Q9NQT6 498 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 PKD2L2Q9NZM6 624 aa14.46□□□□□ -0.09
DDX54-203ENST00000546869 NFKBIL1Q9UBC1 381 aaPredicted RBP14.46□□□□□ -0.09
DDX54-203ENST00000546869 PLXNA2O75051 1894 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms