RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 GALNT8Q9NY28 637 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SEPT10Q9P0V9 454 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 TMEM181Q9P2C4 612 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 HCN2Q9UL51 889 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 RUVBL2Q9Y230 463 aaKnown RBP6.5□□□□□ -1.37
SNHG1-225ENST00000545920 SLC45A1Q9Y2W3 748 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 TCAF1Q9Y4C2 921 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 PCDHGA7Q9Y5G6 932 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 CEPT1Q9Y6K0 416 aa6.5□□□□□ -1.37
SNHG1-225ENST00000545920 PLXNA1Q9UIW2 1896 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 FAM95CA0A1B0GW59 222 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 SH3PXD2BA1X283 911 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MBLAC1A4D2B0 266 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CCDC160A6NGH7 325 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TRIM64BA6NI03 449 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 WASH4PA8MWX3 477 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 NFKBIEO00221 500 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MSTNO14793 375 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 SLC7A4O43246 635 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ADCY6O43306 1168 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 NRP2O60462 931 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 PFDN1O60925 122 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ADAM23O75077 832 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 PGM3O95394 542 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ESRRBO95718 433 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LTFP02788 710 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LTA4HP09960 611 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 SBK3P0C264 359 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CDK4P11802 303 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 DARSP14868 501 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 IDO1P14902 403 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ZNF12P17014 697 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 PTPN1P18031 435 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TFE3P19532 575 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 NFKB1P19838 968 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 IMPDH1P20839 514 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 PCSK1P29120 753 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ADORA2BP29275 332 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 EPHA3P29320 983 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 HOXA11P31270 313 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CD68P34810 354 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LEPRP48357 1165 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ARCN1P48444 511 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ADARP55265 1226 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ATP6V0D1P61421 351 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CRADDP78560 199 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 HYAL2Q12891 473 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TUBA3CQ13748 450 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 VGLL4Q14135 290 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 FASTKQ14296 549 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LPIN1Q14693 890 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 PPP2R5DQ14738 602 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 DGKDQ16760 1214 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TBC1D25Q3MII6 688 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MTX3Q5HYI7 312 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TREML2Q5T2D2 321 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TMTC4Q5T4D3 741 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 COL13A1Q5TAT6 717 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 BSPRYQ5W0U4 402 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 EGFLAMQ63HQ2 1017 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 REP15Q6BDI9 236 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 IQSEC1Q6DN90 963 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LCN8Q6JVE9 175 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 ZBTB49Q6ZSB9 765 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 NEK10Q6ZWH5 1172 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 GPR141Q7Z602 305 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 GALNT13Q8IUC8 556 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CENPLQ8N0S6 344 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LSMEM2Q8N112 164 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 LILRA2Q8N149 483 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 BBS5Q8N3I7 341 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MINDY1Q8N5J2 469 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 AADATQ8N5Z0 425 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 METTL25Q8N6Q8 603 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 HIPK4Q8NE63 616 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 SPPL2BQ8TCT7 592 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 USP33Q8TEY7 942 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TRAPPC12Q8WVT3 735 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 GAB3Q8WWW8 586 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 RSPH1Q8WYR4 309 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TFAP2CQ92754 450 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MAGED4Q96JG8 741 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CNBD2Q96M20 576 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 RDH12Q96NR8 316 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 AGAP2Q99490 1192 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 PRPF18Q99633 342 aaKnown RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 OSMRQ99650 979 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 DOK1Q99704 481 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 BCL7BQ9BQE9 202 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 C16orf70Q9BSU1 422 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 MLPHQ9BV36 600 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 COLEC11Q9BWP8 271 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 TRIM54Q9BYV2 358 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 OSBPL6Q9BZF3 934 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 CEP44Q9C0F1 390 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 HIPK3Q9H422 1215 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 RETREG1Q9H6L5 497 aa6.49□□□□□ -1.37
SNHG1-225ENST00000545920 WDR55Q9H6Y2 383 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-225ENST00000545920 GLOD4Q9HC38 313 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms