RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 CYP17A1P05093 508 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 ATXN1LP0C7T5 689 aaKnown RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 ADH5P11766 374 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 POLR2EP19388 210 aaKnown RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 CNTFP26441 200 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 MAPK8P45983 427 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 AP1S1P61966 158 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 SNRPD1P62314 119 aaKnown RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 GNGT1P63211 74 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 PPARDQ03181 441 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 THOC5Q13769 683 aaKnown RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 GALNT3Q14435 633 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 EML3Q32P44 896 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 FUT11Q495W5 492 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 ACCSLQ4AC99 568 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 ATXN7L2Q5T6C5 722 aaPredicted RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 NCEH1Q6PIU2 408 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 AHI1Q8N157 1196 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 RYBPQ8N488 228 aaPredicted RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 PAF1Q8N7H5 531 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 DTWD2Q8NBA8 298 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 GABPB2Q8TAK5 448 aaPredicted RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 PDCD6IPQ8WUM4 868 aaKnown RBP10.08□□□□□ -0.8
MDH1-216ENST00000544381 E2F7Q96AV8 911 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 RSPRY1Q96DX4 576 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 LRRC3BQ96PB8 259 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 CPNE1Q99829 537 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 TM6SF2Q9BZW4 377 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 UGT1A7Q9HAW7 530 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 UGT1A10Q9HAW8 530 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 UGT1A8Q9HAW9 530 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 TRPV4Q9HBA0 871 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 ZFP14Q9HCL3 533 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 NSMCE4AQ9NXX6 385 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 PSD3Q9NYI0 1048 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 NKIRAS1Q9NYS0 192 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 DLGAP2Q9P1A6 1054 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 PCDHGC4Q9Y5F7 938 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 ANKRD36A6QL64 1941 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 MYLKQ15746 1914 aa10.08□□□□□ -0.8
MDH1-216ENST00000544381 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 TMEM120BA0PK00 339 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TRIM49D1C9J1S8 452 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 SMAD6O43541 496 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 VAPBO95292 243 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 PAPSS2O95340 614 aaPredicted RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 CRTAMO95727 393 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 SRCP12931 536 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 CHN1P15882 459 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 CREB1P16220 341 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 KRT4P19013 534 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 GP5P40197 560 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 NNMTP40261 264 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 CSNK1DP48730 415 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 DGKGP49619 791 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 EPHB1P54762 984 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 ECT2LQ008S8 904 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 GUCY1A3Q02108 690 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TERF2Q15554 542 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 SMAD1Q15797 465 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 CNGA3Q16281 694 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 HSP90AA5PQ58FG0 334 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TSTD2Q5T7W7 516 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 GRTP1Q5TC63 336 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 MBLAC2Q68D91 279 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TRIM68Q6AZZ1 485 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TTC19Q6DKK2 380 aaPredicted RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 KIAA0930Q6ICG6 404 aaPredicted RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 ESRP1Q6NXG1 681 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 PACS1Q6VY07 963 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 STRA8Q7Z7C7 330 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 SIX5Q8N196 739 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 ANKRD42Q8N9B4 389 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 PLPP7Q8NBV4 271 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 LPCAT1Q8NF37 534 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 MDM1Q8TC05 714 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 BRSK1Q8TDC3 778 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 BLOC1S5Q8TDH9 187 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 ATP2A3Q93084 1043 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 ISG20Q96AZ6 181 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 ALKBH8Q96BT7 664 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 RPL10LQ96L21 214 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 ZNF778Q96MU6 729 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TRIB3Q96RU7 358 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 TDRD1Q9BXT4 1180 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 KCNK12Q9HB15 430 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 SSU72Q9NP77 194 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 TIMMDC1Q9NPL8 285 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 IARS2Q9NSE4 1012 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 TREX1Q9NSU2 369 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 INTS9Q9NV88 658 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.07□□□□□ -0.88e-7■■■■□ 23.2
MDH1-216ENST00000544381 IL1RAPL1Q9NZN1 696 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 EVLQ9UI08 416 aaPredicted RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 SMG5Q9UPR3 1016 aaKnown RBP10.07□□□□□ -0.8
MDH1-216ENST00000544381 SLC8A2Q9UPR5 921 aa10.07□□□□□ -0.8
MDH1-216ENST00000544381 HS3ST2Q9Y278 367 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms