RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ZNF765Q7L2R6 523 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PLD3Q8IV08 490 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 CRYBG2Q8N1P7 616 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RFFLQ8WZ73 363 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 BORCS5Q969J3 196 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF333Q96JL9 665 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ZNF514Q96K75 400 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 DBNDD2Q9BQY9 259 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 OSBPL6Q9BZF3 934 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MTFR1LQ9H019 292 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 TMEM168Q9H0V1 697 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PIGUQ9H490 435 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MEI4A8MW99 385 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 TCP11X1B4DZS4 312 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 C22orf46C9J442 243 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 CSDE1O75534 798 aaKnown RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 USP2O75604 605 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 POU2F2P09086 479 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 GM2AP17900 193 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PTAFRP25105 342 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MED21Q13503 144 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ARHGAP19Q14CB8 494 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RSBN1LQ6PCB5 846 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NECAB2Q7Z6G3 386 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 DMRTC2Q8IXT2 367 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PHTF2Q8N3S3 785 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 AGBL3Q8NEM8 1001 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 IFI44Q8TCB0 444 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ARMC5Q96C12 935 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PLEKHA8Q96JA3 519 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NHEJ1Q9H9Q4 299 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 DNAJC28Q9NX36 388 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 LRFN1Q9P244 771 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 SALL4Q9UJQ4 1053 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MAP3K2Q9Y2U5 619 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PCDHGA7Q9Y5G6 932 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ARFGEF2Q9Y6D5 1785 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 TEX51A0A1B0GUA7 166 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 A0A1W2PRV1 198 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NPC1O15118 1278 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NUAK1O60285 661 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 SNX3O60493 162 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ENDOD1O94919 500 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 CDH1P12830 882 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 CKMT2P17540 419 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NMT1P30419 496 aaKnown RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 LMAN2Q12907 356 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 PTGDRQ13258 359 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RRP1BQ14684 758 aaKnown RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 ZIK1Q3SY52 487 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 SPESP1Q6UW49 350 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 GDPD3Q7L5L3 318 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 EFL1Q7Z2Z2 1120 aaKnown RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 SIX6OS1Q8N1H7 587 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 RIT1Q92963 219 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 CPNE2Q96FN4 548 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MAGEB10Q96LZ2 347 aaPredicted RBP8.91□□□□□ -0.98
VPS13D-212ENST00000543766 BLZF1Q9H2G9 400 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 MORF4L1Q9UBU8 362 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 DCTN4Q9UJW0 460 aa8.91□□□□□ -0.98
VPS13D-212ENST00000543766 LGALS16A8MUM7 142 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 FMO6PO60774 539 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 ENTPD5O75356 428 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 SPAG7O75391 227 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 RECQL4O94761 1208 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 RXRAP19793 462 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 FGFR3P22607 806 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 RPA1P27694 616 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 POU1F1P28069 291 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 MAPK12P53778 367 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 IFI35P80217 286 aaPredicted RBP8.9□□□□□ -0.98
VPS13D-212ENST00000543766 FOLH1Q04609 750 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 SMCO1Q147U7 214 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 RTN1Q16799 776 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 DNAL1Q4LDG9 190 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 PRR16Q569H4 304 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 C9orf152Q5JTZ5 239 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 MOXD1Q6UVY6 613 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 IL27RAQ6UWB1 636 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 HORMAD1Q86X24 394 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 KLBQ86Z14 1044 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 GLG1Q92896 1179 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 FOPNLQ96NB1 174 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 FEM1AQ9BSK4 669 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 RC3H2Q9HBD1 1191 aaKnown RBP8.9□□□□□ -0.98
VPS13D-212ENST00000543766 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 FGFR1OP2Q9NVK5 253 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 IPO11Q9UI26 975 aaKnown RBP8.9□□□□□ -0.98
VPS13D-212ENST00000543766 MID2Q9UJV3 735 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 DLGAP4Q9Y2H0 992 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 MYH6P13533 1939 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 NID2Q14112 1375 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 OR2AG2A6NM03 316 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 HUS1O60921 280 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 CLPXO76031 633 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 LCN1P31025 176 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 SLC1A3P43003 542 aa8.9□□□□□ -0.98
VPS13D-212ENST00000543766 CLK2P49760 499 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms