RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	GIMAP7	Q8NHV1	300 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	FBXO27	Q8NI29	283 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	FAM45A	Q8TCE6	357 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SUSD6	Q92537	303 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	STMN2	Q93045	179 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	IFT43	Q96FT9	208 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	IGSF21	Q96ID5	467 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	FAR2	Q96K12	515 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	CNDP1	Q96KN2	507 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SEMA3C	Q99985	751 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	S1PR5	Q9H228	398 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	GPAM	Q9HCL2	828 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	TCF7L2	Q9NQB0	619 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	IGSF5	Q9NSI5	407 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	SEPT3	Q9UH03	358 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	AFF4	Q9UHB7	1163 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	LRRC42	Q9Y546	428 aa		11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	HELZ	P42694	1942 aa	Known RBP	11.29	□□□□□ -0.6
LDHA-222	ENST00000543695	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	GRID2	O43424	1007 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	LDB2	O43679	373 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	KDELR3	O43731	214 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	CLDN11	O75508	207 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	RPP40	O75818	363 aa	Known RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	NDST3	O95803	873 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	CHRNG	P07510	517 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	COX4I1	P13073	169 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	NCF2	P19878	526 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	OGN	P20774	298 aa	Known RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	CES1	P23141	567 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	PSMA3	P25788	255 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	HOXD9	P28356	352 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	SLC6A4	P31645	630 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	VHL	P40337	213 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	GLRB	P48167	497 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	NAGLU	P54802	743 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	PRAME	P78395	509 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	SATB1	Q01826	763 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	BTK	Q06187	659 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	SLC34A1	Q06495	639 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	ZNF460	Q14592	562 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	IHH	Q14623	411 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	CBX2	Q14781	532 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	HERC3	Q15034	1050 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	RCN1	Q15293	331 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	ZRSR2	Q15696	482 aa	Known RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	ARL13A	Q5H913	290 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	HECTD3	Q5T447	861 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	RBM20	Q5T481	1227 aa	Known RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	VWA5B1	Q5TIE3	1220 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	CES5A	Q6NT32	575 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	KDELC2	Q7Z4H8	507 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	TMEM173	Q86WV6	379 aa	Predicted RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	LSMEM2	Q8N112	164 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	AFAP1L2	Q8N4X5	818 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	MAPK15	Q8TD08	544 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	BRSK1	Q8TDC3	778 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	HEXDC	Q8WVB3	486 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	WDR60	Q8WVS4	1066 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	MYEOV	Q96EZ4	313 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	OLFM1	Q99784	485 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	DDX50	Q9BQ39	737 aa	Known RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	MGME1	Q9BQP7	344 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	RTKN	Q9BST9	563 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	THTPA	Q9BU02	230 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	POPDC3	Q9HBV1	291 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	NCKIPSD	Q9NZQ3	722 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	STX18	Q9P2W9	335 aa	Known RBP	11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	MUTYH	Q9UIF7	546 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	ANGPTL2	Q9UKU9	493 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	IRAK3	Q9Y616	596 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	SCN8A	Q9UQD0	1980 aa		11.28	□□□□□ -0.6
LDHA-222	ENST00000543695	GOLGA8Q	A0A0J9YX86	632 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	ILVBL	A1L0T0	632 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	GOLGA8O	A6NCC3	632 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	TRPC5OS	A6NMA1	111 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	GOLGA8N	F8WBI6	632 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695		H0Y3Z8	333 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	AURKA	O14965	403 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	MUSK	O15146	869 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	CCNT2	O60583	730 aa	Known RBP	11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	CLASP2	O75122	1294 aa	Known RBP	11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	FKBP6	O75344	327 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	KRT36	O76013	467 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	S1PR4	O95977	384 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	PENK	P01210	267 aa	Predicted RBP	11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	SERPINF2	P08697	491 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	CTSA	P10619	480 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	TFEB	P19484	476 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	ETFB	P38117	255 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	PLA2G5	P39877	138 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	PPP3CC	P48454	512 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	OXCT1	P55809	520 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	ACTR3	P61158	418 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	GALNT1	Q10472	559 aa	Predicted RBP	11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	ACAP2	Q15057	778 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	CCDC6	Q16204	474 aa		11.27	□□□□□ -0.61
LDHA-222	ENST00000543695	SH2D4B	Q5SQS7	431 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms