RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 VASH2Q86V25 355 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 ARFGAP1Q8N6T3 406 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 EXD3Q8N9H8 876 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 EXTL1Q92935 676 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 NSMCE3Q96MG7 304 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 ERGIC2Q96RQ1 377 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 CMKLR1Q99788 373 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 PARVAQ9NVD7 372 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 FOXJ2Q9P0K8 574 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 B4GALT6Q9UBX8 382 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 LIMA1Q9UHB6 759 aaKnown RBP12.82□□□□□ -0.36
GPN3-203ENST00000543199 SCN8AQ9UQD0 1980 aa12.82□□□□□ -0.36
GPN3-203ENST00000543199 TNFRSF10CO14798 259 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 NUDT21O43809 227 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 PNLIPP16233 465 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 FERP16591 822 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 CDK11BP21127 795 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 TRIM23P36406 574 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 MAZP56270 477 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 POLR2LP62875 67 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 MYL5Q02045 173 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 AMZ1Q400G9 498 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 DNTTIP2Q5QJE6 756 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 MANEAQ5SRI9 462 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 DENND2CQ68D51 928 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 PNCKQ6P2M8 343 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 ZFAND4Q86XD8 727 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 SLITRK4Q8IW52 837 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 PDCD6IPQ8WUM4 868 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 USP7Q93009 1102 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 COL26A1Q96A83 441 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 NUS1Q96E22 293 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 ZNF830Q96NB3 372 aaPredicted RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 ARHGAP9Q9BRR9 750 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 SEMA6CQ9H3T2 930 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 CLMPQ9H6B4 373 aa12.81□□□□□ -0.36
GPN3-203ENST00000543199 CARS2Q9HA77 564 aaKnown RBP12.81□□□□□ -0.36
GPN3-203ENST00000543199 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 EIF3CLB5ME19 914 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 DYNC1I1O14576 645 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 PRPSAP2O60256 369 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 UQCRHP07919 91 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 HOXC4P09017 264 aaPredicted RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 CCDC172P0C7W6 258 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 MYCLP1P12525 358 aaPredicted RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 TNFAIP3P21580 790 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 ALDH4A1P30038 563 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 MIPP30301 263 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 AP1S1P61966 158 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 IL10RBQ08334 325 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 NSUN2Q08J23 767 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPN3-203ENST00000543199 SLC10A7Q0GE19 358 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 RFTN1Q14699 578 aaPredicted RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 CNGA3Q16281 694 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 LINC00303Q3SY05 128 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 KIAA1524Q8TCG1 905 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 TMEM159Q96B96 161 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 PSKH2Q96QS6 385 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 EIF3CQ99613 913 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 TRIM5Q9C035 493 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 TRIM4Q9C037 500 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 NAT10Q9H0A0 1025 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 SPATS2LQ9NUQ6 558 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 SEPT10Q9P0V9 454 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 SEPT3Q9UH03 358 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 PCDHGC4Q9Y5F7 938 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 GOLGA6CA6NDK9 693 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 GOLGA6BA6NDN3 693 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 C9orf172C9J069 976 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 RNF8O76064 485 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 GOLGA6DP0CG33 693 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 CCNB1P14635 433 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 AK4P27144 223 aaPredicted RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 OR1D5P58170 312 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 KCNC4Q03721 635 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 ZNF235Q14590 738 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 LBRQ14739 615 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 C16orf72Q14CZ0 275 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 IQCB1Q15051 598 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 TSR1Q2NL82 804 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 TMCO4Q5TGY1 634 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 PLEKHA7Q6IQ23 1121 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 CYP4V2Q6ZWL3 525 aaPredicted RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 APTXQ7Z2E3 356 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 IRF2BP2Q7Z5L9 587 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 PIM3Q86V86 326 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 HEATR4Q86WZ0 1026 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 SPC24Q8NBT2 197 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 RCBTB1Q8NDN9 531 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 ZDHHC1Q8WTX9 485 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 JPH3Q8WXH2 748 aaPredicted RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 COQ10AQ96MF6 247 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 SYT11Q9BT88 431 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 GOLGA6AQ9NYA3 693 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
GPN3-203ENST00000543199 PCDHB11Q9Y5F2 797 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 PCDHGA4Q9Y5G9 962 aa12.8□□□□□ -0.36
GPN3-203ENST00000543199 HEMK1Q9Y5R4 338 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms