RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 PCYOX1LQ8NBM8 494 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 DNAJC1Q96KC8 554 aaKnown RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 CIB1Q99828 191 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 TMEM79Q9BSE2 394 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 VPS45Q9NRW7 570 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 DDX18Q9NVP1 670 aaKnown RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 FNIP2Q9P278 1114 aa16.62■□□□□ 0.25
KDM2B-216ENST00000543025 CNOT6Q9ULM6 557 aaKnown RBP16.62■□□□□ 0.25
KDM2B-216ENST00000543025 SLC7A4O43246 635 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 WISP3O95389 354 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 MT-CO1P00395 513 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 MYCP01106 439 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 ZNF23P17027 643 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CST5P28325 142 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 BRCC3P46736 316 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 NFKB2Q00653 900 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 MAPRE1Q15691 268 aaKnown RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 HMBOX1Q6NT76 420 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 ISCA2Q86U28 154 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 LRRTM3Q86VH5 581 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 MYO1HQ8N1T3 1032 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 TRIML2Q8N7C3 387 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 OR10T2Q8NGX3 314 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 TMEM209Q96SK2 561 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CCT7Q99832 543 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 NOL11Q9H8H0 719 aaKnown RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 NT5MQ9NPB1 228 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 PNPLA3Q9NST1 481 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 TRPV2Q9Y5S1 764 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 BBIP1A8MTZ0 92 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 WASH4PA8MWX3 477 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 PEX11BO96011 259 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CDH2P19022 906 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 TSPAN8P19075 237 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CD86P42081 329 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CDKN2DP55273 166 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 NRG1Q02297 640 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 ITKQ08881 620 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CCSAPQ6IQ19 270 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 TMEM207Q6UWW9 146 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 C14orf80Q86SX3 495 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 DRAXINQ8NBI3 349 aaPredicted RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 OR6P1Q8NGX9 317 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 SLC29A1Q99808 456 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 SLC39A3Q9BRY0 314 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 MFSD1Q9H3U5 465 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 FBRSL1Q9HCM7 1045 aaKnown RBP16.61■□□□□ 0.25
KDM2B-216ENST00000543025 DSEQ9UL01 958 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 PHF24Q9UPV7 400 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 CEPT1Q9Y6K0 416 aa16.61■□□□□ 0.25
KDM2B-216ENST00000543025 A0A1B0GTW7 788 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 KPNA6O60684 536 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 MAXP61244 160 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 HERVK_113P63132 956 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 PRAMEP78395 509 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 FBXO46Q6PJ61 603 aaPredicted RBP16.6■□□□□ 0.25
KDM2B-216ENST00000543025 CXCL17Q6UXB2 119 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 FUNDC1Q8IVP5 155 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 CLYBLQ8N0X4 340 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 PNPLA1Q8N8W4 532 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 OR2T34Q8NGX1 318 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 OR2T3Q8NH03 318 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ERVK-6Q9BXR3 956 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 TIMMDC1Q9NPL8 285 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ARMC1Q9NVT9 282 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 MYRFQ9Y2G1 1151 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 MIA3Q5JRA6 1907 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 H3BSA7 217 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ALDOCP09972 364 aaKnown RBP16.6■□□□□ 0.25
KDM2B-216ENST00000543025 GPX3P22352 226 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 GRIA3P42263 894 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 KCNC1P48547 511 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 PGFP49763 221 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 MLLT6P55198 1093 aaPredicted RBP16.6■□□□□ 0.25
KDM2B-216ENST00000543025 KCNA10Q16322 511 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 KIF19Q2TAC6 998 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 MARC1Q5VT66 337 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ZBTB49Q6ZSB9 765 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 LDB1Q86U70 411 aaPredicted RBP16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ANKFN1Q8N957 763 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 FAM81AQ8TBF8 368 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 C3orf30Q96M34 536 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 SERPINB11Q96P15 392 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ASB2Q96Q27 587 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 MTG1Q9BT17 334 aaPredicted RBP16.6■□□□□ 0.25
KDM2B-216ENST00000543025 ANKRD60Q9BZ19 345 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 NOL6Q9H6R4 1146 aaKnown RBP16.6■□□□□ 0.25
KDM2B-216ENST00000543025 NUDT5Q9UKK9 219 aa16.6■□□□□ 0.25
KDM2B-216ENST00000543025 A0A0J9YYE9 177 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 MROH6A6NGR9 719 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 ZNF839A8K0R7 811 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 H3BNH8 94 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 HTRA2O43464 458 aaPredicted RBP16.59■□□□□ 0.25
KDM2B-216ENST00000543025 TIPRLO75663 272 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 S1PR4O95977 384 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 ASGR1P07306 291 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 GRIK1P39086 918 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 UGT3A2Q3SY77 523 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 UNC50Q53HI1 259 aa16.59■□□□□ 0.25
KDM2B-216ENST00000543025 OVOS1Q6IE37 1185 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms