RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 CLDN7O95471 211 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 KRT14P02533 472 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 PIRTP0C851 137 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 PI4KAP42356 2102 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 CSNK1EP49674 416 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 STC1P52823 247 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 IRX4P78413 519 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 OVGP1Q12889 678 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 OLIG2Q13516 323 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 SPARCL1Q14515 664 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 LRRC14Q15048 493 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 WSCD2Q2TBF2 565 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 DENND2CQ68D51 928 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 TCEAL6Q6IPX3 200 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 GCNT7Q6ZNI0 430 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 TECPR1Q7Z6L1 1165 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 ABI3BPQ7Z7G0 1075 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 IQCHQ86VS3 1027 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 RAVER1Q8IY67 606 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 GPR161Q8N6U8 529 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 FAM174AQ8TBP5 190 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 TCEAL3Q969E4 200 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 DTD2Q96FN9 168 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 BMFQ96LC9 184 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 APOL2Q9BQE5 337 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 DDX47Q9H0S4 455 aaKnown RBP17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 ARNT2Q9HBZ2 717 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 HACD3Q9P035 362 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 NEU2Q9Y3R4 380 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 ZNF711Q9Y462 761 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 SPO11Q9Y5K1 396 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 WDR87Q6ZQQ6 2873 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
RABGGTA-203ENST00000543002 A0A1B0GVT2 93 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 E7EVH7 732 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 FOXD2O60548 495 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 USP12O75317 370 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 GAS8O95995 478 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 WNT1P04628 370 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 C1SP09871 688 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 CLDN2P57739 230 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 IRF4Q15306 451 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 DENND5AQ6IQ26 1287 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 LAYNQ6UX15 382 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 Q6ZVL8 140 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 LYSMD3Q7Z3D4 306 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 TMC3Q7Z5M5 1100 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 CCHCR1Q8TD31 782 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 SLCO2A1Q92959 643 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 NUS1Q96E22 293 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 TRABDQ9H4I3 376 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 ZFYVE1Q9HBF4 777 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 MBNL1Q9NR56 388 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 SHOC2Q9UQ13 582 aa17.11■□□□□ 0.33
RABGGTA-203ENST00000543002 DMDP11532 3685 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 POM121BA6NF01 834 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 A6NNZ2 444 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 H0Y8X5 98 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 MAGEC1O60732 1142 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 SUN1O94901 812 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 ECEL1O95672 775 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 IGFALSP35858 605 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 ETV3P41162 512 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 LMAN1P49257 510 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 C21orf59P57076 290 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 TRIP13Q15645 432 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 KYAT3Q6YP21 454 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 PRR23CQ6ZRP0 262 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 LINC00523Q86TU6 105 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 ZNF592Q92610 1267 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 EID2BQ96D98 161 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 KLHDC7BQ96G42 594 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 RUNDC3BQ96NL0 473 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 GPR63Q9BZJ6 419 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 CDC23Q9UJX2 597 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 CACNA1EQ15878 2313 aa17.1■□□□□ 0.33
RABGGTA-203ENST00000543002 FAM186AA6NE01 2351 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 RGSL1A5PLK6 1076 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 GOLGA8CPA6NN73 597 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 TLR4O00206 839 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 ARHGAP33O14559 1287 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 URI1O94763 535 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 APRTP07741 180 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 SYPP08247 313 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 VPS41P49754 854 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 PFN3P60673 137 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 BASP1P80723 227 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 BNC1Q01954 994 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 GRIK2Q13002 908 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 GPS1Q13098 491 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 KCTD19Q17RG1 926 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 RFLNAQ6ZTI6 216 aa17.09■□□□□ 0.33
RABGGTA-203ENST00000543002 ZNF765Q7L2R6 523 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms