RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 VPS28Q9UK41 221 aa3.66□□□□□ -1.82
LEMD3-204ENST00000542032 ODF2LQ9ULJ1 636 aa3.66□□□□□ -1.82
LEMD3-204ENST00000542032 ICAM5Q9UMF0 924 aa3.66□□□□□ -1.82
LEMD3-204ENST00000542032 NAALADL1Q9UQQ1 740 aa3.66□□□□□ -1.82
LEMD3-204ENST00000542032 RRP7AQ9Y3A4 280 aaKnown RBP3.66□□□□□ -1.82
LEMD3-204ENST00000542032 TCF20Q9UGU0 1960 aaKnown RBP3.65□□□□□ -1.82
LEMD3-204ENST00000542032 C17orf113A0A1B0GUU1 675 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 TRIM64A6NGJ6 449 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 TRIM64BA6NI03 449 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 CH25HO95992 272 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 IGKV3-20P01619 116 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 IGHV4-30-4P0DP06 118 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 PORP16435 677 aaPredicted RBP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 SRD5A1P18405 259 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 PSMA3P25788 255 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 RPL3P39023 403 aaKnown RBP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 RGS2P41220 211 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 GALNT2Q10471 571 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 DLG1Q12959 904 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 MYBPHQ13203 477 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 PPP2R5CQ13362 524 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 BECN1Q14457 450 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 ZNF718Q3SXZ3 478 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 DNAJC21Q5F1R6 531 aaKnown RBP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 ATG16L1Q676U5 607 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 RPUSD3Q6P087 351 aaKnown RBP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 SLC22A25Q6T423 547 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 IL20RBQ6UXL0 311 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 LCA5Q86VQ0 697 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 TEX11Q8IYF3 940 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 MUC20Q8N307 709 aaPredicted RBP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 PGBD5Q8N414 524 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 NGEFQ8N5V2 710 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 CCDC191Q8NCU4 936 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 APPL2Q8NEU8 664 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 NR4A3Q92570 626 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 RNF125Q96EQ8 232 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 SCMH1Q96GD3 660 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 IGSF21Q96ID5 467 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 ADGRG7Q96K78 797 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 ITPAQ9BY32 194 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 DBNDD1Q9H9R9 158 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 OR6C3Q9NZP0 311 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 ADD3Q9UEY8 706 aaKnown RBP3.65□□□□□ -1.83
LEMD3-204ENST00000542032 NDRG3Q9UGV2 375 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 PCDHGB4Q9UN71 923 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 NFS1Q9Y697 457 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 PIAS3Q9Y6X2 628 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 CLSPNQ9HAW4 1339 aa3.65□□□□□ -1.83
LEMD3-204ENST00000542032 hCG_1807616A0A1W2PRN6 198 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SH2D7A6NKC9 451 aaPredicted RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 C19orf81C9J6K1 198 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SLC25A17O43808 307 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 DKC1O60832 514 aaKnown RBP eCLIP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 GAGE7O76087 117 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 TMEM63AO94886 807 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 IGHDP01880 384 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 CLTBP09497 229 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 GAGE12FP0CL80 117 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 GAGE12GP0CL81 117 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 GAGE12IP0CL82 117 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ALOX12P18054 663 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ITGAXP20702 1163 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 MMP14P50281 582 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 CCR9P51686 369 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ECT2LQ008S8 904 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 TBL3Q12788 808 aaKnown RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 GAGE1Q13065 139 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 GAGE4Q13068 117 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SNTA1Q13424 505 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 CUL4AQ13619 759 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 DHX34Q14147 1143 aaKnown RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SMC1AQ14683 1233 aaKnown RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SLC39A14Q15043 492 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ANKRD1Q15327 319 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SF3B4Q15427 424 aaKnown RBP eCLIP3.64□□□□□ -1.831e-10■■■■■ 47.3
LEMD3-204ENST00000542032 XKR9Q5GH70 373 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 TYW3Q6IPR3 259 aaKnown RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ZNF449Q6P9G9 518 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 KLHL24Q6TFL4 600 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 TMTC3Q6ZXV5 915 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 USP43Q70EL4 1123 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ZNF771Q7L3S4 317 aaPredicted RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 CPXM2Q8N436 756 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 LSM14AQ8ND56 463 aaKnown RBP3.64□□□□□ -1.83
LEMD3-204ENST00000542032 DNAAF1Q8NEP3 725 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 ARRDC2Q8TBH0 407 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 BICD1Q96G01 975 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 LRFN5Q96NI6 719 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SPAG5Q96R06 1193 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 MPHOSPH8Q99549 860 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 SLF1Q9BQI6 1058 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 MXD3Q9BW11 206 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 HSF4Q9ULV5 492 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 PSAT1Q9Y617 370 aa3.64□□□□□ -1.83
LEMD3-204ENST00000542032 TDRD9Q8NDG6 1382 aaKnown RBP3.63□□□□□ -1.83
LEMD3-204ENST00000542032 A0A0U1RQF3 1178 aa3.63□□□□□ -1.83
LEMD3-204ENST00000542032 MAGEA13PA6NCF6 341 aa3.63□□□□□ -1.83
LEMD3-204ENST00000542032 H7C0S8 307 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms