RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 PTK2BQ14289 1009 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 FASTKQ14296 549 aaKnown RBP11.54□□□□□ -0.56
C11orf54-214ENST00000540113 PDK3Q15120 406 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 TLR1Q15399 786 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 OGFRL1Q5TC84 451 aaPredicted RBP11.54□□□□□ -0.56
C11orf54-214ENST00000540113 KIAA0408Q6ZU52 694 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 TEX26Q8N6G2 289 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 ICA1LQ8NDH6 482 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 OR7D4Q8NG98 312 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 RAET1EQ8TD07 263 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 BCL7CQ8WUZ0 217 aaPredicted RBP11.54□□□□□ -0.56
C11orf54-214ENST00000540113 KCNA7Q96RP8 456 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
C11orf54-214ENST00000540113 SEMA6AQ9H2E6 1030 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 ZDHHC7Q9NXF8 308 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.54□□□□□ -0.56
C11orf54-214ENST00000540113 TRAF6Q9Y4K3 522 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 PCDHGA7Q9Y5G6 932 aa11.54□□□□□ -0.56
C11orf54-214ENST00000540113 A0A1B0GTL3 188 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 DRGXA6NNA5 263 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 H3BMM5 538 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 UBXN8O00124 270 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 SCAMP3O14828 347 aaKnown RBP11.53□□□□□ -0.56
C11orf54-214ENST00000540113 GPC4O75487 556 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 INHAP05111 366 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 SELPP16109 830 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
C11orf54-214ENST00000540113 HK2P52789 917 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 PSME3P61289 254 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 SERINC3Q13530 473 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 ACAP2Q15057 778 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 OR4D1Q15615 310 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 UNC50Q53HI1 259 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 REP15Q6BDI9 236 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 CYP2R1Q6VVX0 501 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 TAS1R1Q7RTX1 841 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 LGI2Q8N0V4 545 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 ATP6V1E2Q96A05 226 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 TADA1Q96BN2 335 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 LRCH3Q96II8 777 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 LRGUKQ96M69 825 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 MRPL1Q9BYD6 325 aaKnown RBP11.53□□□□□ -0.56
C11orf54-214ENST00000540113 MFSD1Q9H3U5 465 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 IL1RL2Q9HB29 575 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 SCN5AQ14524 2016 aa11.53□□□□□ -0.56
C11orf54-214ENST00000540113 ARVCFO00192 962 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 PSMD12O00232 456 aaPredicted RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 ACOT8O14734 319 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 CASQ2O14958 399 aaPredicted RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 CD3EAPO15446 510 aaKnown RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 SLC7A4O43246 635 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 RBP1P09455 135 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 SLC6A4P31645 630 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 RGRP47804 291 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 CDKN1CP49918 316 aaPredicted RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 PRMT2P55345 433 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 SH3BP2P78314 561 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 DUSP4Q13115 394 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 GPR17Q13304 367 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 ZNF235Q14590 738 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 ZNF678Q5SXM1 525 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 IL23RQ5VWK5 629 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 FUT10Q6P4F1 479 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 SETD3Q86TU7 594 aaPredicted RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 FAM110BQ8TC76 370 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 RANBP9Q96S59 729 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 SPON2Q9BUD6 331 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 VCX3BQ9H321 246 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 ELAC1Q9H777 363 aaKnown RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 MEAF6Q9HAF1 191 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 POLR3BQ9NW08 1133 aaPredicted RBP11.52□□□□□ -0.56
C11orf54-214ENST00000540113 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 UBAP1Q9NZ09 502 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 IKZF3Q9UKT9 509 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 FAM50BQ9Y247 325 aa11.52□□□□□ -0.56
C11orf54-214ENST00000540113 CHD5Q8TDI0 1954 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 LOC285095A0A1B0GVY8 99 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 UBA6A0AVT1 1052 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 FKTNO75072 461 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 RNASEH2AO75792 299 aaKnown RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 CSPG5O95196 566 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 RTN3O95197 1032 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 PGM3O95394 542 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 GLP2RO95838 553 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 ZDHHC11BP0C7U3 371 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 COL6A1P12109 1028 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 ETS2P15036 469 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 CD1DP15813 335 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 IMPDH1P20839 514 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 DNAJB1P25685 340 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 YBX1P67809 324 aaKnown RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 TNK2Q07912 1038 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 ADGRE1Q14246 886 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 PFKFB4Q16877 469 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 GEN1Q17RS7 908 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 PRSS55Q6UWB4 352 aaPredicted RBP11.52□□□□□ -0.57
C11orf54-214ENST00000540113 EP400NLQ6ZTU2 488 aa11.52□□□□□ -0.57
C11orf54-214ENST00000540113 ABI1Q8IZP0 508 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms