RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 A0A1W2PR77 199 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CCDC151A5D8V7 595 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 LRRC72A6NJI9 287 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 GOLGA8CPA6NN73 597 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 H0Y8X5 98 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 MAP3K13O43283 966 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 NDUFS2O75306 463 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 ANXA9O76027 345 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 PCDH8O95206 1070 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 EPN2O95208 641 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 PAK4O96013 591 aaPredicted RBP13.01□□□□□ -0.33
CCDC42-202ENST00000539522 SOD1P00441 154 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 H2AFXP16104 143 aaPredicted RBP13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CA5AP35218 305 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 STC1P52823 247 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 POLR2LP62875 67 aaKnown RBP13.01□□□□□ -0.33
CCDC42-202ENST00000539522 GPS1Q13098 491 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 PTPRCAPQ14761 206 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 AGERQ15109 404 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CCDC6Q16204 474 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 MAP9Q49MG5 647 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 TPRG1LQ5T0D9 272 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 NEK5Q6P3R8 708 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 LAYNQ6UX15 382 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 GCNT7Q6ZNI0 430 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CEP68Q76N32 757 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CCDC89Q8N998 374 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 IFT81Q8WYA0 676 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CENPTQ96BT3 561 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 SLC6A18Q96N87 628 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 TBL1YQ9BQ87 522 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 HINFPQ9BQA5 517 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 SLC17A9Q9BYT1 436 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 SMOC1Q9H4F8 434 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 CASS4Q9NQ75 786 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 AAR2Q9Y312 384 aaKnown RBP13.01□□□□□ -0.33
CCDC42-202ENST00000539522 HCN4Q9Y3Q4 1203 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 KCTD3Q9Y597 815 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 OTOGLQ3ZCN5 2332 aa13.01□□□□□ -0.33
CCDC42-202ENST00000539522 PATE3B3GLJ2 98 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 K7ESM1 405 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 TPH1P17752 444 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 IGFALSP35858 605 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 FDFT1P37268 417 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 ETV3P41162 512 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 DHPSP49366 369 aaPredicted RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 CLDN2P57739 230 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 VSNL1P62760 191 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 RPS21P63220 83 aaKnown RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 ELP6Q0PNE2 266 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 TRADDQ15628 312 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 WSCD2Q2TBF2 565 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 CFAP58Q5T655 872 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 RNASEH2BQ5TBB1 312 aaKnown RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 KIAA1161Q6NSJ0 714 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 ASCL5Q7RTU5 278 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 TMC3Q7Z5M5 1100 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 CAND1Q86VP6 1230 aaKnown RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 NAT8LQ8N9F0 302 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 PLA2G15Q8NCC3 412 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 BBOF1Q8ND07 529 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 OR52K1Q8NGK4 314 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 RMDN1Q96DB5 314 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 IFT43Q96FT9 208 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 BMFQ96LC9 184 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 AGAP2Q99490 1192 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 MYOCQ99972 504 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 ADGRE3Q9BY15 652 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 FAM129AQ9BZQ8 928 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 MAGEE1Q9HCI5 957 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 PARD6AQ9NPB6 346 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 FSCN3Q9NQT6 498 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 GPR27Q9NS67 375 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 PNMA8BQ9ULN7 279 aaPredicted RBP13□□□□□ -0.33
CCDC42-202ENST00000539522 SHOC2Q9UQ13 582 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 ZNF711Q9Y462 761 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 GON4LQ3T8J9 2241 aa13□□□□□ -0.33
CCDC42-202ENST00000539522 DMXL1Q9Y485 3027 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 POM121BA6NF01 834 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 GAPDHSO14556 408 aaPredicted RBP12.99□□□□□ -0.33
CCDC42-202ENST00000539522 NDC80O14777 642 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 SLC31A1O15431 190 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 LDB2O43679 373 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 BUD23O43709 281 aaKnown RBP12.99□□□□□ -0.33
CCDC42-202ENST00000539522 RECQL5O94762 991 aaPredicted RBP12.99□□□□□ -0.33
CCDC42-202ENST00000539522 FGF1P05230 155 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 APRTP07741 180 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 HLA-DPA1P20036 260 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 CD27P26842 260 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 ACTN2P35609 894 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 ADCY8P40145 1251 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 MTM1Q13496 603 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 CERCAMQ5T4B2 595 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 KCTD16Q68DU8 428 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 ERAP2Q6P179 960 aa12.99□□□□□ -0.33
CCDC42-202ENST00000539522 C4orf22Q6V702 233 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms