RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SLC12A1Q13621 1099 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 KPNB1Q14974 876 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 LRRC14Q15048 493 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 DHCR24Q15392 516 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 RALGPS1Q5JS13 557 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SIRPB2Q5JXA9 342 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TEDDM1Q5T9Z0 273 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 LGSNQ5TDP6 509 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 THEMIS2Q5TEJ8 643 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 TMEM154Q6P9G4 183 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CES3Q6UWW8 571 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 RASSF3Q86WH2 238 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 C4orf33Q8N1A6 199 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PPFIBP2Q8ND30 876 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 FAM13CQ8NE31 585 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PPHLN1Q8NEY8 458 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 LRRC8CQ8TDW0 803 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PEX13Q92968 403 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ELSPBP1Q96BH3 223 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 APOPT1Q96IL0 206 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NSMCE3Q96MG7 304 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ZNF778Q96MU6 729 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 KXD1Q9BQD3 176 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 FAM83CQ9BQN1 747 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 SPON2Q9BUD6 331 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 PLA2G2FQ9BZM2 168 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 MYLK2Q9H1R3 596 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 THG1LQ9NWX6 298 aaKnown RBP8.89□□□□□ -0.99
DDB1-213ENST00000539332 NSMCE4AQ9NXX6 385 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 EPS15L1Q9UBC2 864 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 LHX3Q9UBR4 397 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 ACTL7AQ9Y615 435 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 PSAT1Q9Y617 370 aa8.89□□□□□ -0.99
DDB1-213ENST00000539332 NCOR1O75376 2440 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 HEATR9A2RTY3 570 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 MAGEA13PA6NCF6 341 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 OTOL1A6NHN0 477 aaPredicted RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 SNAP91O60641 907 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ECI2O75521 394 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 NDST3O95803 873 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ADH1CP00326 375 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 DHRS4L1P0CG22 281 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ERVK-10P10266 1014 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ARSAP15289 507 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 PSMC3P17980 439 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 SP100P23497 879 aaPredicted RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 RPA3P35244 121 aaPredicted RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 CSKP41240 450 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ETV4P43268 484 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 PTDSS1P48651 473 aaKnown RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 CDK18Q07002 472 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ITKQ08881 620 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 PDGFRLQ15198 375 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 CCDC6Q16204 474 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 KCNMB4Q86W47 210 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ACMSDQ8TDX5 336 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 ATP2A3Q93084 1043 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 HLA-CQ95604 372 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 UTP4Q969X6 686 aaKnown RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 ERP27Q96DN0 273 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 NR1H4Q96RI1 486 aaPredicted RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 RBBP8Q99708 897 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 RPP25Q9BUL9 199 aaKnown RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 VCX3BQ9H321 246 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 MMADHCQ9H3L0 296 aaPredicted RBP8.88□□□□□ -0.99
DDB1-213ENST00000539332 EBF3Q9H4W6 596 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 VCX3AQ9NNX9 186 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 SLC17A6Q9P2U8 582 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 VPS28Q9UK41 221 aa8.88□□□□□ -0.99
DDB1-213ENST00000539332 PLXNB3Q9ULL4 1909 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 ANHXE9PGG2 379 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 CBX4O00257 560 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 INSIG1O15503 277 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 HOXC11O43248 304 aaPredicted RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 MBTPS2O43462 519 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 CCDC22O60826 627 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 SPAG7O75391 227 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 GJB3O75712 270 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 NFATC1O95644 943 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 PRLP01236 227 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 ALDOAP04075 364 aaKnown RBP8.87□□□□□ -0.99
DDB1-213ENST00000539332 ITGA2BP08514 1039 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 ADH5P11766 374 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 CA4P22748 312 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 HLA-FP30511 346 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 CD70P32970 193 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 CSNK1DP48730 415 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 LIMK2P53671 638 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 LMAN2Q12907 356 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 HTR4Q13639 388 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 LAMB3Q13751 1172 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 GRM2Q14416 872 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 POU6F1Q14863 301 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 PCSK7Q16549 785 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 TSTD2Q5T7W7 516 aa8.87□□□□□ -0.99
DDB1-213ENST00000539332 GRTP1Q5TC63 336 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms