RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DPPA4Q7L190 304 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 HEATR4Q86WZ0 1026 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 AGBL5Q8NDL9 886 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 NUS1Q96E22 293 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 CINPQ9BW66 212 aaPredicted RBP14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 GSDMCQ9BYG8 508 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 LRRC19Q9H756 370 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 SLC39A1Q9NY26 324 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 ADAM22Q9P0K1 906 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 TMEM9Q9P0T7 183 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 FZD10Q9ULW2 581 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 PCDHGA3Q9Y5H0 932 aa14.02□□□□□ -0.17
SMARCA4-206ENST00000538456 NBPF19A0A087WUL8 3843 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 USP9XQ93008 2570 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 SPTBN1Q01082 2364 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 GOLGA6CA6NDK9 693 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 GOLGA6BA6NDN3 693 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 ZNF891A8MT65 544 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 WASH4PA8MWX3 477 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 PDE2AO00408 941 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 ZW10O43264 779 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 FUCA1P04066 466 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 GOLGA6DP0CG33 693 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 PPM1FP49593 454 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 KLK7P49862 253 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 PAPOLAP51003 745 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 LIMK2P53671 638 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 NR1D2Q14995 579 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 AFMIDQ63HM1 303 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 C17orf82Q86X59 251 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 NRSN1Q8IZ57 195 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 OR4D9Q8NGE8 314 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 C9orf43Q8TAL5 461 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 PTCD2Q8WV60 388 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 ECHDC3Q96DC8 303 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 MCEEQ96PE7 176 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 DDA1Q9BW61 102 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 GANQ9H2C0 597 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 PHPT1Q9NRX4 125 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 GPATCH2LQ9NWQ4 482 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 OCIAD1Q9NX40 245 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 GOLGA6AQ9NYA3 693 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 B4GALT6Q9UBX8 382 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 TUBD1Q9UJT1 453 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 SUFUQ9UMX1 484 aa14.01□□□□□ -0.17
SMARCA4-206ENST00000538456 EFCAB7A8K855 629 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 PPM1DO15297 605 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 NKX2-8O15522 239 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 RAD1O60671 282 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 CEACAM5P06731 702 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 THRAP10827 490 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 CR2P20023 1033 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 SOX5P35711 763 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 GPR3P46089 330 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 CSNK1DP48730 415 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 SCNN1BP51168 640 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 ZNF143P52747 638 aaPredicted RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 NDST2P52849 883 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 POLR2FP61218 127 aaKnown RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 POLR2LP62875 67 aaKnown RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 TRA2AQ13595 282 aaKnown RBP eCLIP14□□□□□ -0.172e-6■■■■□ 23.6
SMARCA4-206ENST00000538456 CLPPQ16740 277 aaPredicted RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 DPCR1Q3MIW9 517 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 ANKS6Q68DC2 871 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 DNAJC24Q6P3W2 148 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 TRIM72Q6ZMU5 477 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 C3orf20Q8ND61 904 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 COQ10AQ96MF6 247 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 SLC39A8Q9C0K1 460 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 CDH19Q9H159 772 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 GPN2Q9H9Y4 310 aaPredicted RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 SP110Q9HB58 689 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 FAM207AQ9NSI2 230 aaPredicted RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 SEPT11Q9NVA2 429 aaKnown RBP14□□□□□ -0.17
SMARCA4-206ENST00000538456 KCNK4Q9NYG8 393 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 TAB2Q9NYJ8 693 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 ANAPC2Q9UJX6 822 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 ST14Q9Y5Y6 855 aa14□□□□□ -0.17
SMARCA4-206ENST00000538456 IGHV1OR21-1A0A087WYE8 117 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 TTC24A2A3L6 582 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 ANKRD62A6NC57 917 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 ARHGAP42A6NI28 874 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 DFFAO00273 331 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 DUX1O43812 170 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 CALB1P05937 261 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 UNGP13051 313 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 POLD2P49005 469 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 GSCP56915 257 aaPredicted RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 RPL7AP62424 266 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 CTBSQ01459 385 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 NCAPHQ15003 741 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 CNGA3Q16281 694 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 SNAP47Q5SQN1 464 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 DCAF12Q5T6F0 453 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 DOK6Q6PKX4 331 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 ARHGAP36Q6ZRI8 547 aa13.99□□□□□ -0.17
SMARCA4-206ENST00000538456 ZNF761Q86XN6 746 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms