RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LEXMQ3ZCV2 418 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 TMEM220Q6QAJ8 160 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 BBS12Q6ZW61 710 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HEATR4Q86WZ0 1026 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 FBXL6Q8N531 539 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 ZNF398Q8TD17 642 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PDLIM2Q96JY6 352 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HOMER3Q9NSC5 361 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PLAGL1Q9UM63 463 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 TCRBV7S3A2A0A539 114 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 FAM149AA5PLN7 773 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 IFRD1O00458 451 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 AURKAO14965 403 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PRPF4O43172 522 aaKnown RBP eCLIP7.25□□□□□ -1.252e-8■■■■■ 27.6
MSH6-209ENST00000538136 VIMP08670 466 aaKnown RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 AVPR2P30518 371 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PPARGP37231 505 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 DMWDQ09019 674 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 LYSMD4Q5XG99 296 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HTR3DQ70Z44 454 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 ERN2Q76MJ5 926 aaKnown RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 STRA8Q7Z7C7 330 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 TMEM139Q8IV31 216 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 KATNAL2Q8IYT4 538 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PQLC3Q8N755 202 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 SNF8Q96H20 258 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HBEGFQ99075 208 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PARD6BQ9BYG5 372 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 ATG10Q9H0Y0 220 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 XKR8Q9H6D3 395 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 WDR26Q9H7D7 661 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 CAB39LQ9H9S4 337 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 A0A0G2JN53 185 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HEATR9A2RTY3 570 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 APBB3O95704 486 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HIST1H2AGP0C0S8 130 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 CYP2A6P11509 494 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 HIST1H2ADP20671 130 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 AKT2P31751 481 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PHBP35232 272 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 CLCN6P51797 869 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 SLC25A11Q02978 314 aaKnown RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 CDH17Q12864 832 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 SERINC3Q13530 473 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 FASTKD3Q14CZ7 662 aaKnown RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 MAP7D1Q3KQU3 841 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 TMTC4Q5T4D3 741 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HHATQ5VTY9 493 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 DENND6AQ8IWF6 608 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 FAM20CQ8IXL6 584 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 ZC3H3Q8IXZ2 948 aaKnown RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 EID2Q8N6I1 236 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 DCAF4L2Q8NA75 395 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HIST1H2AHQ96KK5 128 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 SLC6A18Q96N87 628 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 HIST1H2AJQ99878 128 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 H2AFJQ9BTM1 129 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 C1QTNF7Q9BXJ2 289 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 NUSAP1Q9BXS6 441 aaKnown RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 PHPT1Q9NRX4 125 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 SYBUQ9NX95 663 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 PKD2L2Q9NZM6 624 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 CD274Q9NZQ7 290 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 MARCOQ9UEW3 520 aaPredicted RBP7.25□□□□□ -1.25
MSH6-209ENST00000538136 INTUQ9ULD6 942 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 CKAP5Q14008 2032 aa7.25□□□□□ -1.25
MSH6-209ENST00000538136 COL4A6Q14031 1691 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MUC3AQ02505 3323 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 A0A1W2PPC1 479 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MTSS1O43312 755 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ESRRBO95718 433 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 S100BP04271 92 aaPredicted RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 PREPP48147 710 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 RGS19P49795 217 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 TPMTP51580 245 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MAPK10P53779 464 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 CYP4F2P78329 520 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ZBTB16Q05516 673 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 TRAF2Q12933 501 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ZNF460Q14592 562 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 C1orf210Q8IVY1 113 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FIBINQ8TAL6 211 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ELSPBP1Q96BH3 223 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MYRFLQ96LU7 910 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 SLC2A13Q96QE2 648 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FERD3LQ96RJ6 166 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 SLC38A3Q99624 504 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 PRSS16Q9NQE7 514 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 KRT87PA6NCN2 255 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 POM121BA6NF01 834 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 RHPN2P1A8MT19 583 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MATN3O15232 486 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MAP3K7O43318 606 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 VIPP01282 170 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 OPRD1P41143 372 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 PIK3CGP48736 1102 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 CLCNKAP51800 687 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 VSNL1P62760 191 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 CHRNA6Q15825 494 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 DPYSL2Q16555 572 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms