RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 TEAD2Q15562 447 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 SDCCAG8Q86SQ7 713 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-206ENST00000536545 EFHBQ8N7U6 833 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 TXNDC5Q8NBS9 432 aaKnown RBP22.71■■□□□ 1.23
HMGA2-206ENST00000536545 PDCD6IPQ8WUM4 868 aaKnown RBP22.71■■□□□ 1.23
HMGA2-206ENST00000536545 ANKRD49Q8WVL7 239 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 MYO19Q96H55 970 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 TM6SF2Q9BZW4 377 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 CDH19Q9H159 772 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 HACD3Q9P035 362 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 INTS6Q9UL03 887 aaKnown RBP22.71■■□□□ 1.23
HMGA2-206ENST00000536545 CAPN14A8MX76 684 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 C5orf67F2Z3F1 127 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 ARHGEF15O94989 841 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 SLC4A1P02730 911 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 HOXA9P31269 272 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 IRS1P35568 1242 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 ABL2P42684 1182 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 PFKPQ01813 784 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 CAMK1Q14012 370 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 TMEM207Q6UWW9 146 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 TUBB6Q9BUF5 446 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 KLC4Q9NSK0 619 aa22.71■■□□□ 1.23
HMGA2-206ENST00000536545 MTF2Q9Y483 593 aaPredicted RBP22.71■■□□□ 1.23
HMGA2-206ENST00000536545 MGRN1O60291 552 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 CCDC22O60826 627 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 PGLSO95336 258 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 RHOP08100 348 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 CCDC166P0CW27 439 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 PTPN2P17706 415 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 CSNK1DP48730 415 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 IDH3AP50213 366 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 RASSF2P50749 326 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 SLC5A9Q2M3M2 681 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 LPGAT1Q92604 370 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 USP13Q92995 863 aaPredicted RBP22.7■■□□□ 1.22
HMGA2-206ENST00000536545 UTP4Q969X6 686 aaKnown RBP22.7■■□□□ 1.22
HMGA2-206ENST00000536545 AARSD1Q9BTE6 412 aaKnown RBP22.7■■□□□ 1.22
HMGA2-206ENST00000536545 POPDC3Q9HBV1 291 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 ABCB8Q9NUT2 735 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 ARMCX1Q9P291 453 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 PCDHB9Q9Y5E1 797 aa22.7■■□□□ 1.22
HMGA2-206ENST00000536545 NOTCH4Q99466 2003 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 CXorf51AA0A1B0GTR3 108 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 CYBBP04839 570 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 CHRNGP07510 517 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 SERPINA6P08185 405 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 ATP5F1P24539 256 aaPredicted RBP22.69■■□□□ 1.22
HMGA2-206ENST00000536545 PMLP29590 882 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 NAGLUP54802 743 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 DNAJB13P59910 316 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 C1QTNF8P60827 252 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 ASPHQ12797 758 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 PTPRRQ15256 657 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 KLC3Q6P597 504 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 METTL3Q86U44 580 aaKnown RBP22.69■■□□□ 1.22
HMGA2-206ENST00000536545 NSL1Q96IY1 281 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 RILPQ96NA2 401 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 FKBPLQ9UIM3 349 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 RAP2CQ9Y3L5 183 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 ZNF711Q9Y462 761 aa22.69■■□□□ 1.22
HMGA2-206ENST00000536545 ZNF821O75541 412 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-206ENST00000536545 EPCAMP16422 314 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 MPSTP25325 297 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 MAPK8P45983 427 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 ACAP2Q15057 778 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 ARHGAP15Q53QZ3 475 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 ARMC12Q5T9G4 340 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 TREML1Q86YW5 311 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 PIH1D2Q8WWB5 315 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 MOCOSQ96EN8 888 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 TCF12Q99081 682 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 ACSS2Q9NR19 701 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 H7C0S8 307 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 GRM6O15303 877 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 CLASP2O75122 1294 aaKnown RBP22.68■■□□□ 1.22
HMGA2-206ENST00000536545 PENKP01210 267 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-206ENST00000536545 RBP1P09455 135 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 CALB2P22676 271 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 PTPN4P29074 926 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 CCR10P46092 362 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 USP4Q13107 963 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 PITRM1Q5JRX3 1037 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 PRSS36Q5K4E3 855 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 LSMEM2Q8N112 164 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 LEMD2Q8NC56 503 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 OR6K2Q8NGY2 324 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 RAB3IPQ96QF0 476 aaPredicted RBP22.68■■□□□ 1.22
HMGA2-206ENST00000536545 TLE6Q9H808 572 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 CHD7Q9P2D1 2997 aa22.68■■□□□ 1.22
HMGA2-206ENST00000536545 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-206ENST00000536545 SOBPA7XYQ1 873 aa22.67■■□□□ 1.22
HMGA2-206ENST00000536545 STX7O15400 261 aaKnown RBP22.67■■□□□ 1.22
HMGA2-206ENST00000536545 HTRA2O43464 458 aaPredicted RBP22.67■■□□□ 1.22
HMGA2-206ENST00000536545 NPHS1O60500 1241 aa22.67■■□□□ 1.22
HMGA2-206ENST00000536545 SOCS5O75159 536 aa22.67■■□□□ 1.22
HMGA2-206ENST00000536545 PRAMEF12O95522 483 aa22.67■■□□□ 1.22
HMGA2-206ENST00000536545 HNRNPA1P09651 372 aaKnown RBP eCLIP22.67■■□□□ 1.22
HMGA2-206ENST00000536545 HSPA1AP0DMV8 641 aaKnown RBP22.67■■□□□ 1.22
HMGA2-206ENST00000536545 HSPA1BP0DMV9 641 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms