RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SOD1P00441 154 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 C1SP09871 688 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 CCDC175P0C221 793 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 CKMT2P17540 419 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 MX2P20592 715 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 ETV3P41162 512 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 VAV2P52735 878 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 POLR2LP62875 67 aaKnown RBP16.41■□□□□ 0.22
ATL3-202ENST00000535789 ITKQ08881 620 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 TCEA2Q15560 299 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 DEFB133Q30KQ1 61 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 ARMC12Q5T9G4 340 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 SPOCD1Q6ZMY3 1216 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 RFX6Q8HWS3 928 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 LMX1AQ8TE12 382 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 PTCD2Q8WV60 388 aaKnown RBP16.41■□□□□ 0.22
ATL3-202ENST00000535789 TSACCQ96A04 125 aaPredicted RBP16.41■□□□□ 0.22
ATL3-202ENST00000535789 DTD2Q96FN9 168 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 SCRN2Q96FV2 425 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 BRD8Q9H0E9 1235 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 DDX56Q9NY93 547 aaKnown RBP16.41■□□□□ 0.22
ATL3-202ENST00000535789 AMACRQ9UHK6 382 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 CHKBQ9Y259 395 aa16.41■□□□□ 0.22
ATL3-202ENST00000535789 hCG_1818297A0A087WSY0 165 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 A0A0J9YYE9 177 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 USP27XA6NNY8 438 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 H3BM21 787 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 TAF4O00268 1085 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 TOR1BO14657 336 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 PJA2O43164 708 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 IPO7O95373 1038 aaKnown RBP16.4■□□□□ 0.22
ATL3-202ENST00000535789 JCHAINP01591 159 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 TRBC1P01850 177 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 CKMT1AP12532 417 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 TSHRP16473 764 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 HNF1BP35680 557 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 TRIM23P36406 574 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 PEX5P50542 639 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 KIAA1024LP59773 190 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 SKOR1P84550 965 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 PTK2BQ14289 1009 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 ACOX1Q15067 660 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 PRKD1Q15139 912 aaPredicted RBP16.4■□□□□ 0.22
ATL3-202ENST00000535789 PRRT3Q5FWE3 981 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 LRRC66Q68CR7 880 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 DENND2CQ68D51 928 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 REXO1L1PQ8IX06 675 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 KATNAL2Q8IYT4 538 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 C17orf53Q8N3J3 647 aaPredicted RBP16.4■□□□□ 0.22
ATL3-202ENST00000535789 FAM181AQ8N9Y4 354 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 CCNYQ8ND76 341 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 OR1E3Q8WZA6 343 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 NUS1Q96E22 293 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 MRPL40Q9NQ50 206 aaKnown RBP16.4■□□□□ 0.22
ATL3-202ENST00000535789 ZMIZ1Q9ULJ6 1067 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 CSNK1G3Q9Y6M4 447 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 CHD6Q8TD26 2715 aa16.4■□□□□ 0.22
ATL3-202ENST00000535789 ADAMTS20P59510 1910 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 LOC400499M0QZD8 3231 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 A0A1W2PQ67 120 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 CAPN8A6NHC0 703 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 KRT37O76014 449 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 CD86P42081 329 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 HK3P52790 923 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 INSM1Q01101 510 aaPredicted RBP16.39■□□□□ 0.21
ATL3-202ENST00000535789 CDKN3Q16667 212 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 HES3Q5TGS1 186 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 CRTC1Q6UUV9 634 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 ZNF662Q6ZS27 426 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 Q6ZVL8 140 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 TECPR1Q7Z6L1 1165 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 HID1Q8IV36 788 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 PAF1Q8N7H5 531 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.39■□□□□ 0.21
ATL3-202ENST00000535789 ZCCHC14Q8WYQ9 949 aaKnown RBP16.39■□□□□ 0.21
ATL3-202ENST00000535789 TADA1Q96BN2 335 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 TBATAQ96M53 351 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 WDR92Q96MX6 357 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 TRIB3Q96RU7 358 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 BOCQ9BWV1 1114 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 TRIM10Q9UDY6 481 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 UNC13CQ8NB66 2214 aa16.39■□□□□ 0.21
ATL3-202ENST00000535789 ZSCAN12O43309 604 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 CST8O60676 142 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 FUCA1P04066 466 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 CYP2A6P11509 494 aaPredicted RBP16.38■□□□□ 0.21
ATL3-202ENST00000535789 SRP54P61011 504 aaKnown RBP16.38■□□□□ 0.21
ATL3-202ENST00000535789 PPARDQ03181 441 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 PTSQ03393 145 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 AP1B1Q10567 949 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 ZCCHC8Q6NZY4 707 aaKnown RBP16.38■□□□□ 0.21
ATL3-202ENST00000535789 PNCKQ6P2M8 343 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 GUSBP11Q6P575 273 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 ENPP7Q6UWV6 458 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 USP45Q70EL2 814 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 KIAA1328Q86T90 577 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 SFTPA2Q8IWL1 248 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 SLC35F3Q8IY50 421 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 LRRC57Q8N9N7 239 aa16.38■□□□□ 0.21
ATL3-202ENST00000535789 LPCAT1Q8NF37 534 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms