RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CAPN10Q9HC96 672 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 AASDHPPTQ9NRN7 309 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 RAB6BQ9NRW1 208 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 SEMA4GQ9NTN9 838 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 NEU2Q9Y3R4 380 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 RALGAPA1Q6GYQ0 2036 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 KNL1Q8NG31 2342 aa12.08□□□□□ -0.48
CHD4-203ENST00000535717 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 A0A1B0GVT2 93 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 A0A1W2PR77 199 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 GOLGA6CA6NDK9 693 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 H0Y8X5 98 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 PSMD11O00231 422 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 PSMD3O43242 534 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 AP2A1O95782 977 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 KRT14P02533 472 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 FGF1P05230 155 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 C1SP09871 688 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 GOLGA6DP0CG33 693 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 ZNF30P17039 623 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 CD38P28907 300 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 PLA2G5P39877 138 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 ETV3P41162 512 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 STC1P52823 247 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 IRX4P78413 519 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 BNC1Q01954 994 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 SEMA5AQ13591 1074 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 STAT4Q14765 748 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 CSRP2Q16527 193 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 WSCD2Q2TBF2 565 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 DENND5AQ6IQ26 1287 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 C4orf22Q6V702 233 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 KDM7AQ6ZMT4 941 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 GCNT7Q6ZNI0 430 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 RFLNAQ6ZTI6 216 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 Q6ZVL8 140 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 LYSMD3Q7Z3D4 306 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 TECPR1Q7Z6L1 1165 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
CHD4-203ENST00000535717 ZNF592Q92610 1267 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 EID2BQ96D98 161 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 BMFQ96LC9 184 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 C1QTNF7Q9BXJ2 289 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 LRRC40Q9H9A6 602 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 FSCN3Q9NQT6 498 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 MBNL1Q9NR56 388 aaKnown RBP12.07□□□□□ -0.48
CHD4-203ENST00000535717 GOLGA6AQ9NYA3 693 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 SLC6A14Q9UN76 642 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 ZNF711Q9Y462 761 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 HS3ST3A1Q9Y663 406 aa12.07□□□□□ -0.48
CHD4-203ENST00000535717 PTPRZ1P23471 2315 aaPredicted RBP12.06□□□□□ -0.48
CHD4-203ENST00000535717 POM121BA6NF01 834 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 ERI2A8K979 691 aaKnown RBP12.06□□□□□ -0.48
CHD4-203ENST00000535717 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
CHD4-203ENST00000535717 DYNC1I1O14576 645 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 AURKAO14965 403 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 KHNYNO15037 678 aaKnown RBP12.06□□□□□ -0.48
CHD4-203ENST00000535717 VILLO15195 856 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 TUBB4AP04350 444 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 IGFALSP35858 605 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 PTGIRP43119 386 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 VPS41P49754 854 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 LRRC14Q15048 493 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 IRF4Q15306 451 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 TEAD4Q15561 434 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 ABI3BPQ7Z7G0 1075 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 KLHL7Q8IXQ5 586 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 MFSD2AQ8NA29 543 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 DENND6BQ8NEG7 585 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 GRK7Q8WTQ7 553 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 SLCO2A1Q92959 643 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 DTD2Q96FN9 168 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 SRPK1Q96SB4 655 aaKnown RBP12.06□□□□□ -0.48
CHD4-203ENST00000535717 ZFYVE1Q9HBF4 777 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 ARNT2Q9HBZ2 717 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 PCYOX1Q9UHG3 505 aa12.06□□□□□ -0.48
CHD4-203ENST00000535717 FEZ2Q9UHY8 353 aaPredicted RBP12.06□□□□□ -0.48
CHD4-203ENST00000535717 BPTFQ12830 3046 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 DMXL1Q9Y485 3027 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 PCDH15Q96QU1 1955 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.05□□□□□ -0.48
CHD4-203ENST00000535717 E7EVH7 732 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 CCDC188H7C350 402 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 TLR4O00206 839 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 FPGTO14772 594 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 URI1O94763 535 aaPredicted RBP12.05□□□□□ -0.48
CHD4-203ENST00000535717 SUN1O94901 812 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 ECEL1O95672 775 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 GAS8O95995 478 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 APRTP07741 180 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 LMAN1P49257 510 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 GPS1Q13098 491 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 MSLNQ13421 630 aaPredicted RBP12.05□□□□□ -0.48
CHD4-203ENST00000535717 KIF19Q2TAC6 998 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 Q6ZSR6 202 aa12.05□□□□□ -0.48
CHD4-203ENST00000535717 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms