RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ACAD10Q6JQN1 1059 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PDXDC1Q6P996 788 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PSRC1Q6PGN9 363 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CPLX2Q6PUV4 134 aaKnown RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PRSS45Q7RTY3 260 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PIM3Q86V86 326 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 WDR5BQ86VZ2 330 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 TMTC1Q8IUR5 882 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CPXM2Q8N436 756 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PI4KAP1Q8N8J0 262 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 LINS1Q8NG48 757 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 NEK9Q8TD19 979 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 ST8SIA4Q92187 359 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 TRIB2Q92519 343 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 RPL36ALQ969Q0 106 aaKnown RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 SKA1Q96BD8 255 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CCDC34Q96HJ3 373 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 FAM84BQ96KN1 310 aaPredicted RBP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 C7orf26Q96N11 449 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 TM2D2Q9BX73 214 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 RMI1Q9H9A7 625 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 TMEM248Q9NWD8 314 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 KCND2Q9NZV8 630 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 KLHL13Q9P2N7 655 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNHG1-202ENST00000535689 RABGAP1Q9Y3P9 1069 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PCDHAC2Q9Y5I4 1007 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 HS3ST3B1Q9Y662 390 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CYP46A1Q9Y6A2 500 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 CDK5RAP2Q96SN8 1893 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 TRANK1O15050 2925 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 PHIPQ8WWQ0 1821 aa3.47□□□□□ -1.85
SNHG1-202ENST00000535689 DOCK1Q14185 1865 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SMIM35A0A1B0GVV1 85 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SLC22A23A1A5C7 686 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 EYA2O00167 538 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 RRHO14718 337 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 UGDHO60701 494 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 RBMXL2O75526 392 aaKnown RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 KAT7O95251 611 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 TIMP1P01033 207 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ASNSP08243 561 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 HOXB5P09067 269 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 HOXC6P09630 235 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ARSAP15289 507 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 CD58P19256 250 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 FBLP22087 321 aaKnown RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 CDC25AP30304 524 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ME1P48163 572 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 CFHR1Q03591 330 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 TCP10Q12799 353 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 TRAF2Q12933 501 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SPP2Q13103 211 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 LAMB3Q13751 1172 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SEMA3AQ14563 771 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 IL13RA2Q14627 380 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 CCNG2Q16589 344 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 GSTA3Q16772 222 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 C6orf10Q5SRN2 563 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 C9orf50Q5SZB4 431 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ATG9BQ674R7 924 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 APOBEC3HQ6NTF7 200 aaKnown RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 INO80CQ6PI98 192 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ATF7IPQ6VMQ6 1270 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ZNF782Q6ZMW2 699 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 MDGA2Q7Z553 956 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 YTHDF3Q7Z739 585 aaKnown RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 TADA2BQ86TJ2 420 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 CCDC25Q86WR0 208 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 FOXP4Q8IVH2 680 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 CPOQ8IVL8 374 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 DDIASQ8IXT1 998 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SLC25A41Q8N5S1 370 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ARL14EPQ8N8R7 260 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SCAIQ8N9R8 606 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 C16orf52Q8NHV5 167 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 FAM110DQ8TAY7 271 aaPredicted RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 TMEM170AQ8WVE7 144 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 RAB40AQ8WXH6 277 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 POMGNT1Q8WZA1 660 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 USP6NLQ92738 828 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 SMARCE1Q969G3 411 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 RILPL2Q969X0 211 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 MOAP1Q96BY2 351 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 KIF1BPQ96EK5 621 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 RNF125Q96EQ8 232 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 RNFT2Q96EX2 444 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 NCAPGQ9BPX3 1015 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 H2AFJQ9BTM1 129 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 IDI2Q9BXS1 227 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 HDHD5Q9BXW7 423 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 PAIP1Q9H074 479 aaKnown RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 HIPK3Q9H422 1215 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 EPHX3Q9H6B9 360 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ACAD9Q9H845 621 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 OLA1Q9NTK5 396 aaKnown RBP3.46□□□□□ -1.86
SNHG1-202ENST00000535689 HOXC10Q9NYD6 342 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 NRBP1Q9UHY1 535 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 PCDHGB5Q9Y5G0 923 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 PLXNB2O15031 1838 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms