RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SIX1Q15475 284 aaPredicted RBP22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 DENND2CQ68D51 928 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 ITPRIPL1Q6GPH6 555 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 RFLNAQ6ZTI6 216 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 TECPR1Q7Z6L1 1165 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 SLC35F6Q8N357 371 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 FAM71DQ8N9W8 422 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 PLA2G15Q8NCC3 412 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 DTD2Q96FN9 168 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 IFT43Q96FT9 208 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 MRGPRX2Q96LB1 330 aa22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 CNOT1A5YKK6 2376 aaKnown RBP22.74■■□□□ 1.23
SFSWAP-204ENST00000535399 SPTY2D1-AS1A0A0U1RR47 76 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 LOC285095A0A1B0GVY8 99 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 SH3BP5O60239 455 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 C1SP09871 688 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 CSRP1P21291 193 aaKnown RBP22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 CXCR5P32302 372 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 ARRB1P49407 418 aaPredicted RBP22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 MTM1Q13496 603 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 PDE1CQ14123 709 aaPredicted RBP22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 INPP5AQ14642 412 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 OASLQ15646 514 aaKnown RBP22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 Q6ZVL8 140 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 PELI3Q8N2H9 469 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 NUS1Q96E22 293 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 TMEM121Q9BTD3 319 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 CAAP1Q9H8G2 361 aa22.73■■□□□ 1.23
SFSWAP-204ENST00000535399 YKT6O15498 198 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 KIF5CO60282 957 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 CEP104O60308 925 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 CLDN7O95471 211 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 EPOP01588 193 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 ATXN1LP0C7T5 689 aaKnown RBP22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 PSMB4P28070 264 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 EPHA8P29322 1005 aaPredicted RBP22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 GDF10P55107 478 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 MPP3Q13368 585 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 ESRP1Q6NXG1 681 aaKnown RBP22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 DEFB124Q8NES8 71 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 SAP25Q8TEE9 199 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 C1orf54Q8WWF1 131 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 APOOQ9BUR5 198 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 KCTD5Q9NXV2 234 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 OR1A2Q9Y585 309 aa22.72■■□□□ 1.23
SFSWAP-204ENST00000535399 K7ESM1 405 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 GCATO75600 419 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 ANXA9O76027 345 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 FGGP02679 453 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 TRIM23P36406 574 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 GEMP55040 296 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 BNIP3Q12983 259 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 EIF2B5Q13144 721 aaKnown RBP22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 SUZ12Q15022 739 aaKnown RBP22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 PNCKQ6P2M8 343 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 KANSL1Q7Z3B3 1105 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 DGLUCYQ7Z3D6 616 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 GATAD2AQ86YP4 633 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 NAXDQ8IW45 347 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 IPMKQ8NFU5 416 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 RTP4Q96DX8 246 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 CAMK1GQ96NX5 476 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 MAGEE1Q9HCI5 957 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 BTBD3Q9Y2F9 522 aa22.71■■□□□ 1.23
SFSWAP-204ENST00000535399 LRRK1Q38SD2 2015 aa22.7■■□□□ 1.23
SFSWAP-204ENST00000535399 C1orf232A0A0U1RR37 186 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 ATP1A1P05023 1023 aaKnown RBP22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 PIRTP0C851 137 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 CHRNA4P43681 627 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 THOP1P52888 689 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 PTK2BQ14289 1009 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 ZNF542PQ5EBM4 170 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 SIRPB2Q5JXA9 342 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 CCDC70Q6NSX1 233 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 MACC1Q6ZN28 852 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 LYSMD3Q7Z3D4 306 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 PARGQ86W56 976 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 KLHDC8BQ8IXV7 354 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 EID2BQ96D98 161 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 ABCG8Q9H221 673 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 KLF15Q9UIH9 416 aa22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 PNMA8BQ9ULN7 279 aaPredicted RBP22.7■■□□□ 1.22
SFSWAP-204ENST00000535399 FLRT2O43155 660 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 CBFA2T3O75081 653 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 KCNK5O95279 499 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 ADRA1AP35348 466 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 DPTQ07507 201 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 SNX1Q13596 522 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 NFATC4Q14934 902 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 SLC1A5Q15758 541 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 CCNG2Q16589 344 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 ZNF765Q7L2R6 523 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 RAVER1Q8IY67 606 aaKnown RBP22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 NRSN1Q8IZ57 195 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 MAIP1Q8WWC4 291 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 FUBP1Q96AE4 644 aaKnown RBP22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 DNAJC28Q9NX36 388 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 CD84Q9UIB8 345 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 PCOLCE2Q9UKZ9 415 aa22.69■■□□□ 1.22
SFSWAP-204ENST00000535399 AAR2Q9Y312 384 aaKnown RBP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms