RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ITGA8P53708 1063 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 GAS6Q14393 721 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 ARSIQ5FYB1 569 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 ANKRD22Q5VYY1 191 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 NAPEPLDQ6IQ20 393 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 PKN3Q6P5Z2 889 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 Q6ZS52 159 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 SYT13Q7L8C5 426 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 CAMK1DQ8IU85 385 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCARB1-204ENST00000535005 FITM2Q8N6M3 262 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 IPMKQ8NFU5 416 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 IER2Q9BTL4 223 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 CHRDQ9H2X0 955 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 ZDHHC6Q9H6R6 413 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 ETAA1Q9NY74 926 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 DKK3Q9UBP4 350 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
SCARB1-204ENST00000535005 SMIM23A6NLE4 172 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 AP3B1O00203 1094 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 CDH16O75309 829 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 LEFTY1O75610 366 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 TMEM63AO94886 807 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PGLSO95336 258 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PIGNO95427 931 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 TTC4O95801 387 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 NDST3O95803 873 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ABHD2P08910 425 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 MLNP12872 115 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 HLA-DPA1P20036 260 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 COL9A1P20849 921 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 COPAP53621 1224 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ROR2Q01974 943 aaKnown RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 STAT4Q14765 748 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ZRSR2Q15696 482 aaKnown RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 CRY1Q16526 586 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ARMC12Q5T9G4 340 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 DENND5AQ6IQ26 1287 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 KIAA1211LQ6NV74 962 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 SLC30A9Q6PML9 568 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 MAMSTRQ6ZN01 415 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 TBL1YQ9BQ87 522 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 CASS4Q9NQ75 786 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 SIT1Q9Y3P8 196 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 C1QTNF3-AMACRE9PGA6 284 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 RNASEH1O60930 286 aaKnown RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 UGT2B4P06133 528 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 GSTA2P09210 222 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 SPARCL1Q14515 664 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PDCD2Q16342 344 aaPredicted RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PCSK7Q16549 785 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ZNF805Q5CZA5 627 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 FAM46CQ5VWP2 391 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 LRRC8BQ6P9F7 803 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 BRAT1Q6PJG6 821 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 TMEM92Q6UXU6 159 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 SPEM1Q8N4L4 309 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PIP4K2CQ8TBX8 421 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ZNF398Q8TD17 642 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PIH1D2Q8WWB5 315 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 IFT43Q96FT9 208 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 KLHL32Q96NJ5 620 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 TUBB6Q9BUF5 446 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 FSD1LQ9BXM9 530 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 VCXQ9H320 206 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 XAB2Q9HCS7 855 aaKnown RBP12.34□□□□□ -0.43
SCARB1-204ENST00000535005 SENP1Q9P0U3 644 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 CHKBQ9Y259 395 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 PPIL1Q9Y3C6 166 aa12.34□□□□□ -0.43
SCARB1-204ENST00000535005 STK25O00506 426 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 FGF1P05230 155 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 PDHA1P08559 390 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 LINGO3P0C6S8 592 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 BRAFP15056 766 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 DGKEP52429 567 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 POLR2LP62875 67 aaKnown RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 ZBTB16Q05516 673 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 CDH17Q12864 832 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 SLC1A5Q15758 541 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 ZNF776Q68DI1 518 aaPredicted RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 CWF19L1Q69YN2 538 aaKnown RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 ZNF534Q76KX8 674 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 CAND1Q86VP6 1230 aaKnown RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 MMAAQ8IVH4 418 aaKnown RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.44
SCARB1-204ENST00000535005 GRIN3AQ8TCU5 1115 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 MFSD1Q9H3U5 465 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 DLGAP2Q9P1A6 1054 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 PHTF1Q9UMS5 762 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 STK38LQ9Y2H1 464 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 PCDHB9Q9Y5E1 797 aa12.33□□□□□ -0.44
SCARB1-204ENST00000535005 ATG2BQ96BY7 2078 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms