RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 SLC17A6Q9P2U8 582 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 OGDHLQ9ULD0 1010 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 AP4E1Q9UPM8 1137 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 V9GYQ6 96 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 PLXNA4Q9HCM2 1894 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 ARPC4-TTLL3A0A0A6YYG9 625 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 M0QYT0 321 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 PEX14O75381 377 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 CLIC3O95833 236 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 C1QAP02745 245 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 GMPRP36959 345 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 PNPLA4P41247 253 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 SULT1E1P49888 294 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 AKR1D1P51857 326 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 DEFB103AP81534 67 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 CDKL1Q00532 357 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 CCNIQ14094 377 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 IHHQ14623 411 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 DLG2Q15700 870 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 SIGIRRQ6IA17 410 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 SNX19Q92543 992 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 GLMNQ92990 594 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 TSNARE1Q96NA8 513 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 NEK6Q9HC98 313 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 C8orf4Q9NR00 106 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 ADPRHL2Q9NX46 363 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 DOCK4Q8N1I0 1966 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 FRYLO94915 3013 aa9.07□□□□□ -0.96
SF3B2-216ENST00000534765 TRIM49D1C9J1S8 452 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 LYPLA1O75608 230 aaPredicted RBP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SDC4P31431 198 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 KRT6CP48668 564 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 ST13P50502 369 aaKnown RBP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 YWHAZP63104 245 aaKnown RBP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CAV1Q03135 178 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CLCQ05315 142 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 NOMO1Q15155 1222 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 MAPRE1Q15691 268 aaKnown RBP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 GEN1Q17RS7 908 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 LRRC26Q2I0M4 334 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 BSPRYQ5W0U4 402 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CYP20A1Q6UW02 462 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 FRA10AC1Q70Z53 315 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 TAC4Q86UU9 113 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 OFCC1Q8IZS5 231 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CADM3Q8N126 398 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 NAT8LQ8N9F0 302 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SUSD3Q96L08 255 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 PSMD13Q9UNM6 376 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 GJB3O75712 270 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 H6PDO95479 791 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 ITGAVP06756 1048 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CDH1P12830 882 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SELPP16109 830 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 TLE2Q04725 743 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SLC13A2Q13183 592 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 DPYSL2Q16555 572 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SLC25A52Q3SY17 297 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 MTX3Q5HYI7 312 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 NOMO2Q5JPE7 1267 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SLC22A16Q86VW1 577 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SLC7A14Q8TBB6 771 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 AUTS2Q8WXX7 1259 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 TRIM43Q96BQ3 446 aaPredicted RBP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 RMDN1Q96DB5 314 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 ARHGEF4Q9NR80 690 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 ASNSD1Q9NWL6 643 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 STK39Q9UEW8 545 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 ANAPC1Q9H1A4 1944 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 EFEMP2O95967 443 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 NCAM1P13591 858 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CD247P20963 164 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 PTPN9P43378 593 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 GNG2P59768 71 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 TAP1Q03518 808 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SEMA3BQ13214 749 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 HIF1AQ16665 826 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 SLC39A5Q6ZMH5 540 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 IGFN1Q86VF2 1251 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 KCTD13Q8WZ19 329 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 C1orf50Q9BV19 199 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 CLK4Q9HAZ1 481 aaKnown RBP9.06□□□□□ -0.96
SF3B2-216ENST00000534765 KANSL3Q9P2N6 904 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 GNPTGQ9UJJ9 305 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 A0A0C4DFX4 3053 aa9.06□□□□□ -0.96
SF3B2-216ENST00000534765 APOC4-APOC2K7ER74 178 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 APOC2P02655 101 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 UBL4AP11441 157 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF23P17027 643 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CRADDP78560 199 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 TNFAIP8L3Q5GJ75 292 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 VARS2Q5ST30 1063 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PNPLA1Q8N8W4 532 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF398Q8TD17 642 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 WBP2Q969T9 261 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CMTM5Q96DZ9 223 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CDK5RAP1Q96SZ6 601 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms