RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 SLC30A9Q6PML9 568 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 CCDC112Q8NEF3 446 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 ECHDC3Q96DC8 303 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 PCDHB18PQ96TA0 734 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 CDH19Q9H159 772 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 GANQ9H2C0 597 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 TMEM9Q9P0T7 183 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 TUBD1Q9UJT1 453 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 TEX15Q9BXT5 2789 aa14.95□□□□□ -0.02
CTSB-230ENST00000534149 ZNF891A8MT65 544 aaPredicted RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 PDE2AO00408 941 aaPredicted RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 ZW10O43264 779 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 RAD1O60671 282 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 PALMO75781 387 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 CEACAM5P06731 702 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 THRAP10827 490 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 GP1BBP13224 206 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 CR2P20023 1033 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 CSTF2P33240 577 aaKnown RBP eCLIP14.94□□□□□ -0.02
CTSB-230ENST00000534149 CSNK1DP48730 415 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 KLK7P49862 253 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 PAPOLAP51003 745 aaKnown RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 TRA2AQ13595 282 aaKnown RBP eCLIP14.94□□□□□ -0.02
CTSB-230ENST00000534149 TRIM72Q6ZMU5 477 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 HEATR4Q86WZ0 1026 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 C3orf20Q8ND61 904 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 AGBL5Q8NDL9 886 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 OR4D9Q8NGE8 314 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 PTCD2Q8WV60 388 aaKnown RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 NUS1Q96E22 293 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 NSMCE3Q96MG7 304 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 DDA1Q9BW61 102 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 CINPQ9BW66 212 aaPredicted RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 SLC39A8Q9C0K1 460 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 ZNF71Q9NQZ8 489 aaPredicted RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 PHPT1Q9NRX4 125 aaPredicted RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 GPATCH2LQ9NWQ4 482 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 OCIAD1Q9NX40 245 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 SLC39A1Q9NY26 324 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 B4GALT6Q9UBX8 382 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 SUFUQ9UMX1 484 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 ST14Q9Y5Y6 855 aa14.94□□□□□ -0.02
CTSB-230ENST00000534149 SPTAN1Q13813 2472 aaKnown RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 SPENQ96T58 3664 aaKnown RBP14.94□□□□□ -0.02
CTSB-230ENST00000534149 IGHV1OR21-1A0A087WYE8 117 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 ARHGAP42A6NI28 874 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 SIGLEC16A6NMB1 481 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 EFCAB7A8K855 629 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 TRAFD1O14545 582 aaPredicted RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 PPM1DO15297 605 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 NKX2-8O15522 239 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 DUX1O43812 170 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 PRKAR1AP10644 381 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 SOX5P35711 763 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 GPR3P46089 330 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 ZNF143P52747 638 aaPredicted RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 NDST2P52849 883 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 POLR2FP61218 127 aaKnown RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 POLR2LP62875 67 aaKnown RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 DPCR1Q3MIW9 517 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 DENND2CQ68D51 928 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 FAM129CQ86XR2 697 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 NAGSQ8N159 534 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 C9orf43Q8TAL5 461 aaPredicted RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 COQ10AQ96MF6 247 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 CATSPER2Q96P56 530 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 MCEEQ96PE7 176 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 FRMD8Q9BZ67 464 aaPredicted RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 ZMYND15Q9H091 742 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 NLRC4Q9NPP4 1024 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 SAMSN1Q9NSI8 373 aaKnown RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 TRNAU1APQ9NX07 287 aaKnown RBP14.93□□□□□ -0.02
CTSB-230ENST00000534149 TAB2Q9NYJ8 693 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 ANAPC2Q9UJX6 822 aa14.93□□□□□ -0.02
CTSB-230ENST00000534149 USP9XQ93008 2570 aaPredicted RBP14.92□□□□□ -0.02
CTSB-230ENST00000534149 CLEC18AA5D8T8 446 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 EPHB6O15197 1021 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 CALB1P05937 261 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 SCNN1BP51168 640 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 AIF1P55008 147 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 JAM2P57087 298 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 RPL7AP62424 266 aaKnown RBP14.92□□□□□ -0.02
CTSB-230ENST00000534149 CDK3Q00526 305 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 CTBSQ01459 385 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 CNGA3Q16281 694 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 CLEC16AQ2KHT3 1053 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 ANKS6Q68DC2 871 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 DNAJC24Q6P3W2 148 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 CLEC18BQ6UXF7 455 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 ARHGAP36Q6ZRI8 547 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 PHF13Q86YI8 300 aaPredicted RBP14.92□□□□□ -0.02
CTSB-230ENST00000534149 NRSN1Q8IZ57 195 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 CLEC18CQ8NCF0 446 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 SLC45A3Q96JT2 553 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 TEX101Q9BY14 249 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 ASPSCR1Q9BZE9 553 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 VPS16Q9H269 839 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 SP110Q9HB58 689 aa14.92□□□□□ -0.02
CTSB-230ENST00000534149 FAM207AQ9NSI2 230 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms