RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SARM1Q6SZW1 724 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 TECPR1Q7Z6L1 1165 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 TMPRSS12Q86WS5 348 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 DCBLD1Q8N8Z6 715 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 FAM181AQ8N9Y4 354 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 SPATA22Q8NHS9 363 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 RFFLQ8WZ73 363 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 HAUS1Q96CS2 278 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ATXN7L3BQ96GX2 97 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 CCDC42Q96M95 316 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 MCCC1Q96RQ3 725 aaPredicted RBP9.64□□□□□ -0.87
SSBP3-215ENST00000533946 FAM118BQ9BPY3 351 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 TRIM5Q9C035 493 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ABCG8Q9H221 673 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 DEF6Q9H4E7 631 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 CYP4F12Q9HCS2 524 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 UVRAGQ9P2Y5 699 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 TRIM10Q9UDY6 481 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 PRKAB1Q9Y478 270 aa9.64□□□□□ -0.87
SSBP3-215ENST00000533946 OAS3Q9Y6K5 1087 aaKnown RBP9.64□□□□□ -0.87
SSBP3-215ENST00000533946 ATRXP46100 2492 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 ZFC3H1O60293 1989 aaKnown RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 A0A1W2PQM1 296 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 LMO7DNF2Z398 122 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 AURKAO14965 403 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 NOBOXO60393 691 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CSO75390 466 aaKnown RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 RASGRP1O95267 797 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 KRT1P04264 644 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CCNB1P14635 433 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 DESP17661 470 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CD68P34810 354 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 TRIM23P36406 574 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CD86P42081 329 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 YPEL5P62699 121 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CCL7P80098 99 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 OLIG2Q13516 323 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 QPCTQ16769 361 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 HADHQ16836 314 aaKnown RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 INAVAQ3KP66 663 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 ZFYVE27Q5T4F4 411 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 KAZNQ674X7 775 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 SLC9A4Q6AI14 798 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 DOK6Q6PKX4 331 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 HEATR4Q86WZ0 1026 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 DCP2Q8IU60 420 aaKnown RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 Q8N9G6 341 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CCNYQ8ND76 341 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 ACRBPQ8NEB7 543 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 NAT14Q8WUY8 206 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CCDC74AQ96AQ1 378 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 NUS1Q96E22 293 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 DTD2Q96FN9 168 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 IFT43Q96FT9 208 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 PRR11Q96HE9 360 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 NAF1Q96HR8 494 aaKnown RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 WDR92Q96MX6 357 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 OLFM3Q96PB7 478 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 TSGA13Q96PP4 275 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 RBM15Q96T37 977 aaKnown RBP eCLIP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 IL12RB2Q99665 862 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 ZNF670Q9BS34 389 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 LACRTQ9GZZ8 138 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 UBP1Q9NZI7 540 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 SEPT10Q9P0V9 454 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 KLQ9UEF7 1012 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 MOSPD1Q9UJG1 213 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 ATXN7L1Q9ULK2 861 aaPredicted RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CNOT6Q9ULM6 557 aaKnown RBP9.63□□□□□ -0.87
SSBP3-215ENST00000533946 CLCA2Q9UQC9 943 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 SPO11Q9Y5K1 396 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 ALG6Q9Y672 507 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 SCN8AQ9UQD0 1980 aa9.63□□□□□ -0.87
SSBP3-215ENST00000533946 TRBV23OR9-2A0A075B6M9 112 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 A0A0J9YYE9 177 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 EME2A4GXA9 379 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GOLGA6CA6NDK9 693 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GOLGA6BA6NDN3 693 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 FADS2P1A8MWK0 482 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 INPP4BO15327 924 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 USP12O75317 370 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MT-CYBP00156 380 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 TRBC1P01850 177 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 ATP1A1P05023 1023 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 HGFP14210 728 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 CCNCP24863 283 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MAN1A1P33908 653 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 CDKN2BP42772 138 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MAGEA1P43355 309 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 ZNF135P52742 658 aaPredicted RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MAZP56270 477 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PPIDQ08752 370 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 SRSF6Q13247 344 aaKnown RBP9.62□□□□□ -0.87
SSBP3-215ENST00000533946 MTM1Q13496 603 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PTPRCAPQ14761 206 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 PDK2Q15119 407 aa9.62□□□□□ -0.87
SSBP3-215ENST00000533946 TAZQ16635 292 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms