RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 RGMBQ6NW40 437 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 C17orf99Q6UX52 265 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 NOXA1Q86UR1 476 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 KMT5CQ86Y97 462 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 C2CD5Q86YS7 1000 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 FOXRED2Q8IWF2 684 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 ANKRD42Q8N9B4 389 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 CNBD1Q8NA66 436 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 SCCPDHQ8NBX0 429 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 DUSP19Q8WTR2 217 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 TRIM63Q969Q1 353 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 SH3KBP1Q96B97 665 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 CDCA5Q96FF9 252 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF570Q96NI8 536 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 SIN3AQ96ST3 1273 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 LITAFQ99732 161 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 SMYD2Q9NRG4 433 aa2.88□□□□□ -1.95
BRCA2-205ENST00000533776 FAF1Q9UNN5 650 aaPredicted RBP2.88□□□□□ -1.95
BRCA2-205ENST00000533776 AKR1B15C9JRZ8 316 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 IRAK2O43187 625 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 EXTL3O43909 919 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 GNL1P36915 607 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 USP8P40818 1118 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 SEC61BP60468 96 aaKnown RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 NAA25Q14CX7 972 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 EIF2S3LQ2VIR3 472 aaKnown RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 SLC36A4Q6YBV0 504 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 LDHAL6AQ6ZMR3 332 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 KCTD8Q6ZWB6 473 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 FAM160B2Q86V87 743 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 WDR63Q8IWG1 891 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 CHERPQ8IWX8 916 aaKnown RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF248Q8NDW4 579 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 AGBL3Q8NEM8 1001 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 SPPL3Q8TCT6 385 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 ANKRD9Q96BM1 317 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 COG8Q96MW5 612 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 TWNKQ96RR1 684 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 HERPUD2Q9BSE4 406 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 PCDH9Q9HC56 1237 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 DDX4Q9NQI0 724 aaKnown RBP2.87□□□□□ -1.95
BRCA2-205ENST00000533776 MCM9Q9NXL9 1143 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 ALKBH4Q9NXW9 302 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 PADI1Q9ULC6 663 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 CARD8Q9Y2G2 431 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 AMDHD2Q9Y303 409 aa2.87□□□□□ -1.95
BRCA2-205ENST00000533776 FAM90A7PA6NKC0 464 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 SH2D7A6NKC9 451 aaPredicted RBP2.86□□□□□ -1.95
BRCA2-205ENST00000533776 FAM90A22PA8MWA6 464 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 FAM90A12PA8MX19 464 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 FAM90A23PA8MXZ1 464 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 BCAT2O15382 392 aaPredicted RBP2.86□□□□□ -1.95
BRCA2-205ENST00000533776 CYC1P08574 325 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ETFAP13804 333 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 S1PR1P21453 382 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 CLCNKAP51800 687 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ARL4CP56559 192 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF876PQ49A33 203 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 GPATCH4Q5T3I0 446 aaKnown RBP2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ARHGAP17Q68EM7 881 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ANKRD54Q6NXT1 300 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF852Q6ZMS4 543 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF497Q6ZNH5 498 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 MTSS1LQ765P7 747 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 TAOK1Q7L7X3 1001 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 GPAT4Q86UL3 456 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 HERC6Q8IVU3 1022 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF34Q8IZ26 560 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 OR10V1Q8NGI7 309 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ABTB1Q969K4 478 aaPredicted RBP2.86□□□□□ -1.95
BRCA2-205ENST00000533776 ESRP2Q9H6T0 727 aaKnown RBP2.86□□□□□ -1.95
BRCA2-205ENST00000533776 BABAM1Q9NWV8 329 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.86□□□□□ -1.95
BRCA2-205ENST00000533776 GPR52Q9Y2T5 361 aa2.86□□□□□ -1.95
BRCA2-205ENST00000533776 KLK10O43240 276 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 MMP2P08253 660 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 KRT5P13647 590 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 MYOD1P15172 320 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 PAPOLAP51003 745 aaKnown RBP2.85□□□□□ -1.95
BRCA2-205ENST00000533776 ISL1P61371 349 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 GRIK3Q13003 919 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 PPIGQ13427 754 aaKnown RBP eCLIP2.85□□□□□ -1.95
BRCA2-205ENST00000533776 SLC12A1Q13621 1099 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 SIRPB2Q5JXA9 342 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 PDSS1Q5T2R2 415 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 SERTAD4-AS1Q5TG53 156 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 LCTLQ6UWM7 567 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 CEACAM20Q6UY09 585 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 RNF113BQ8IZP6 322 aaKnown RBP2.85□□□□□ -1.95
BRCA2-205ENST00000533776 C1orf87Q8N0U7 546 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 OR2AK2Q8NG84 335 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 MAGEC3Q8TD91 643 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 STAMQ92783 540 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 ZNF524Q96C55 264 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 FBXL8Q96CD0 374 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 LGALS12Q96DT0 336 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 BBS4Q96RK4 519 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 CD180Q99467 661 aa2.85□□□□□ -1.95
BRCA2-205ENST00000533776 PYM1Q9BRP8 204 aaKnown RBP2.85□□□□□ -1.95
BRCA2-205ENST00000533776 LRRC1Q9BTT6 524 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms