RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 PDHA1P08559 390 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 KRT10P13645 584 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 CCNB1P14635 433 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 MX2P20592 715 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 TGM2P21980 687 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 LHCGRP22888 699 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 KELP23276 732 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 KDELR1P24390 212 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 ETV3P41162 512 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 KIAA1024LP59773 190 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 DYNLT1P63172 113 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 RALGPS1Q5JS13 557 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 FAM182AQ5T1J6 154 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 RAET1GQ6H3X3 334 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 PNCKQ6P2M8 343 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 Q6ZVL8 140 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 TAF8Q7Z7C8 310 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 RHOT2Q8IXI1 618 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 CCDC13Q8IYE1 715 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 NDUFAF2Q8N183 169 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 TEX26Q8N6G2 289 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 OR56A4Q8NGH8 313 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 NAT6Q93015 286 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 COQ10AQ96MF6 247 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 LGR4Q9BXB1 951 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 MAK16Q9BXY0 300 aaKnown RBP10.45□□□□□ -0.74
CAPN1-225ENST00000533704 PHPT1Q9NRX4 125 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-225ENST00000533704 HAUS2Q9NVX0 235 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 CD84Q9UIB8 345 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 CHKBQ9Y259 395 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 GPSM3Q9Y4H4 160 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 CFAP47Q6ZTR5 3102 aa10.45□□□□□ -0.74
CAPN1-225ENST00000533704 EME2A4GXA9 379 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 B4DGG1 531 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 KCNK1O00180 336 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 PDE2AO00408 941 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 APOL1O14791 398 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CASC3O15234 703 aaKnown RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 TLX3O43711 291 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 SPOPO43791 374 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 JCHAINP01591 159 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 MPOP05164 745 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CA4P22748 312 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CCNCP24863 283 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 NOP2P46087 812 aaKnown RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 GPR1P46091 355 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 GABREP78334 506 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 AP1B1Q10567 949 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 SLC10A2Q12908 348 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 RTP5Q14D33 572 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CDCP2Q5VXM1 449 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 LRRC66Q68CR7 880 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 FOXR1Q6PIV2 292 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 DOK6Q6PKX4 331 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 LRRC69Q6ZNQ3 347 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 RBM44Q6ZP01 1051 aaKnown RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 RFLNAQ6ZTI6 216 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 HEATR4Q86WZ0 1026 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 RFX6Q8HWS3 928 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 ARL10Q8N8L6 244 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 FAM46DQ8NEK8 389 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 LPCAT1Q8NF37 534 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 PIH1D2Q8WWB5 315 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 MAML1Q92585 1016 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CCDC74AQ96AQ1 378 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 RNF25Q96BH1 459 aaPredicted RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 FAF2Q96CS3 445 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 DTD2Q96FN9 168 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 SCRN2Q96FV2 425 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 TSGA13Q96PP4 275 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 RNF157Q96PX1 679 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 LGMNQ99538 433 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CCDC3Q9BQI4 270 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CEP41Q9BYV8 373 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 TMEM168Q9H0V1 697 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 CARS2Q9HA77 564 aaKnown RBP10.44□□□□□ -0.74
CAPN1-225ENST00000533704 DTLQ9NZJ0 730 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 SEPT10Q9P0V9 454 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 PTPRQQ9UMZ3 2332 aa10.44□□□□□ -0.74
CAPN1-225ENST00000533704 PRSS38A1L453 326 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 MYCLP1P12525 358 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-225ENST00000533704 COMTP21964 271 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 ACTN2P35609 894 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 CD86P42081 329 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 ARHGAP25P42331 645 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 MAGEA1P43355 309 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 GNPDA1P46926 289 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 NIPAL4Q0D2K0 466 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 CCDC173Q0VFZ6 552 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 TBX2Q13207 712 aaPredicted RBP10.43□□□□□ -0.74
CAPN1-225ENST00000533704 SPIDRQ14159 915 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 IHHQ14623 411 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 LLGL1Q15334 1064 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 ISXQ2M1V0 245 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 C3orf38Q5JPI3 329 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 LVRNQ6Q4G3 990 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 NPNTQ6UXI9 565 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 B4GALNT4Q76KP1 1039 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 CACTIN-AS1Q8N1I8 211 aa10.43□□□□□ -0.74
CAPN1-225ENST00000533704 SDR16C5Q8N3Y7 309 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms